issues
search
GeneAssembly
/
biosal
biosal is a distributed BIOlogical Sequence Actor Library. THIS IS A MIRROR.
BSD 2-Clause "Simplified" License
6
stars
1
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
find out why dispatcher.c is failing without the call to core_map_delete
#849
sebhtml
opened
9 years ago
3
The Jenkins instance is down
#848
sebhtml
closed
9 years ago
1
investigate the tail (visitors that finish too slowly) in visitor computation
#847
sebhtml
opened
9 years ago
0
Verify distribution balance with LSH
#846
sebhtml
closed
9 years ago
1
Assign local graph stores to visitors to benefit from data locality
#845
sebhtml
closed
9 years ago
3
request starting kmer from local actor in visitor, then switch to another one
#844
sebhtml
closed
9 years ago
5
use LSH to increase data locality
#843
sebhtml
closed
9 years ago
3
Run Spate on Iowa Native Prairie on hopper
#842
sebhtml
opened
9 years ago
1
add option -enable-log-for-script
#841
sebhtml
closed
9 years ago
1
do a test on Cetus without printf
#840
sebhtml
closed
9 years ago
3
profile with /soft/perftools/hpctw/lib/libmpihpm.a
#839
sebhtml
closed
9 years ago
1
implement LRU in message cache
#838
sebhtml
closed
9 years ago
2
add ACTION_ASSEMBLY_GET_STARTING_VERTEX
#837
sebhtml
closed
9 years ago
1
modify unitig algorithm to increase locality
#836
sebhtml
closed
9 years ago
2
Evaluate adaptive routing on Mira
#835
sebhtml
closed
9 years ago
2
evaluate non-blocking communication on Mira
#834
sebhtml
closed
9 years ago
1
trace a visitor to optimize it
#833
sebhtml
closed
9 years ago
1
run Spate on Iowa Native Prairie on Cetus or Mira 1024x16
#832
sebhtml
opened
9 years ago
11
tests: update build status link for entropy in README
#831
levinas
closed
10 years ago
2
Run Spate on Iowa Native Prairie on Edison
#830
sebhtml
opened
10 years ago
11
assemble Iowa Continuous Corn on Cetus with 1024 nodes
#829
sebhtml
closed
9 years ago
4
trace memory allocations with new Spate code
#828
sebhtml
closed
9 years ago
3
add BGQ initialization routine for memory system
#827
sebhtml
closed
10 years ago
1
add a queue for messages when request count is too high
#826
sebhtml
closed
10 years ago
1
analyze tracepoints between the 2 last reports (10 second window)
#825
sebhtml
closed
10 years ago
4
analyze tracepoints in file spate-2014-11-19-02-24-12-3.01020.txt
#824
sebhtml
closed
10 years ago
3
use memory_cache in dna_kmer
#823
sebhtml
closed
10 years ago
1
try Spate on Edison (Iowa Continuous Corn)
#822
sebhtml
closed
9 years ago
6
Try jemalloc on Blue Gene/Q
#821
sebhtml
closed
10 years ago
1
find memory leaks
#820
sebhtml
closed
9 years ago
3
memory: reduce memory fragmentation on Blue Gene/Q
#819
sebhtml
closed
10 years ago
33
add return codes in tests
#818
sebhtml
closed
10 years ago
4
remove lines with thorium_debug
#817
sebhtml
closed
10 years ago
1
remove duplicate unitigs (they are already deterministic)
#816
sebhtml
opened
10 years ago
0
fix bug in unitigs with minimum coverage 2
#815
sebhtml
closed
10 years ago
5
run latency_probe on mira
#814
sebhtml
closed
10 years ago
5
remove set in multiplexer
#813
sebhtml
closed
10 years ago
1
improve contiguity in hash table
#812
sebhtml
closed
10 years ago
1
encapsulate multiplexed_message
#811
sebhtml
closed
10 years ago
1
add command line option to disable multiplexer
#810
sebhtml
closed
10 years ago
1
thorium: store timestamp in multiplexed buffer for transport
#809
sebhtml
closed
10 years ago
1
simplify code path for multiplexing
#808
sebhtml
closed
10 years ago
1
use red-black tree to order multiplexing buffers
#807
sebhtml
closed
10 years ago
1
avoid final copy in multiplexer
#806
sebhtml
closed
10 years ago
1
implement adaptive multiplexer (vary timeout)
#805
sebhtml
closed
10 years ago
2
reduce visitor actor count to 100
#804
sebhtml
closed
10 years ago
1
add traversal speed
#803
sebhtml
closed
10 years ago
1
convert time from the format 0m0.012s to a number of seconds in JUnit XML output
#802
sebhtml
closed
10 years ago
1
add time in unit test XML result
#801
sebhtml
closed
9 years ago
1
add performance tools in automated tests
#800
sebhtml
opened
10 years ago
0
Next