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GeneDx
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txt2hpo
Python library for extracting HPO encoded phenotypes from text
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Configure Renovate
#64
renovate[bot]
opened
5 months ago
0
ACB-69
#63
mcgeestephen
opened
1 year ago
0
61-Use a cross-platform reference to HOME directory in config.py
#62
rebeccaito
closed
1 year ago
4
TypeError: expected str, bytes or os.PathLike object, not NoneType
#61
ZQhaha
closed
1 year ago
1
Fix installation
#60
jwhite3
opened
2 years ago
1
Installation deprecated
#59
poutant1
closed
2 years ago
7
TypeError: type() takes 1 or 3 arguments
#58
tkmamidi
opened
2 years ago
0
Design grid system
#57
rickbowman-dev63
closed
2 years ago
0
update master
#56
rebeccaito
closed
2 years ago
0
Bump nltk from 3.4.5 to 3.6.5
#55
dependabot[bot]
closed
2 years ago
0
keep negated terms
#54
bennwei
closed
2 years ago
5
Returning HPO terms that do NOT apply
#53
mcgeestephen
closed
2 years ago
0
Skipping parents/sibling phenotypes
#52
mcgeestephen
opened
3 years ago
1
Retaining duplicate terms
#51
jimhavrilla
opened
3 years ago
0
Merge pull request #49 from GeneDx/develop
#50
vgainullin
closed
3 years ago
0
release v0.2.3
#49
vgainullin
closed
3 years ago
0
remove phenopy as dependency
#48
vgainullin
closed
3 years ago
0
Basic Extractor import failed
#47
jimhavrilla
closed
3 years ago
24
update phenopy integration
#46
vgainullin
closed
3 years ago
0
test for blood group query
#45
mcgeestephen
closed
3 years ago
0
Removing "A" as a stop word
#44
mcgeestephen
opened
3 years ago
0
update phenopy api
#43
arvkevi
opened
3 years ago
1
fix #41
#42
mcgeestephen
closed
3 years ago
1
AttributeError: vocab attribute removed from Keyed Vector in Gensim 4.0.0
#41
mcgeestephen
closed
3 years ago
2
Master
#40
vgainullin
closed
4 years ago
0
Bugfix/requirements
#39
vgainullin
closed
4 years ago
0
fix pip install
#38
vgainullin
closed
4 years ago
0
bump version
#37
vgainullin
closed
4 years ago
0
Version/bump
#36
vgainullin
closed
4 years ago
0
fix setup
#35
vgainullin
closed
4 years ago
0
update version
#34
vgainullin
closed
4 years ago
0
Devel 0.2.0.rc
#33
vgainullin
closed
4 years ago
0
add ability to chunk text into phrases by punctuation
#32
vgainullin
closed
4 years ago
0
Bugfix/default params
#31
vgainullin
closed
4 years ago
0
experiment with sorting / not sorting tokens
#30
vgainullin
closed
4 years ago
0
fix hyphenation bug
#29
vgainullin
closed
4 years ago
0
expose negation params
#28
vgainullin
closed
4 years ago
0
fix bug causing punctuation within terms preventing extraction
#27
vgainullin
closed
4 years ago
0
update spellcheck vocabulary
#26
vgainullin
closed
4 years ago
0
remove "absent" from chunk_prefix
#25
vgainullin
closed
4 years ago
0
fix bug where one phenotype was matching two different hpids
#24
vgainullin
closed
4 years ago
0
fix errors in extracting all caps phenotypes
#23
vgainullin
closed
4 years ago
0
add remove_overlapping method
#22
vgainullin
closed
4 years ago
0
fix bug where capitalizated terms didnt align with parsing dictionary
#21
vgainullin
closed
4 years ago
0
Update README.md
#20
vgainullin
closed
4 years ago
0
Docs/update readme
#19
vgainullin
closed
4 years ago
0
Feature/negation
#18
vgainullin
closed
4 years ago
0
Refactor/extract
#17
vgainullin
closed
4 years ago
0
Feature/custom synonyms
#16
vgainullin
closed
4 years ago
0
bugifx/mismapped term
#15
vgainullin
closed
4 years ago
0
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