Genentech jmpost issues

Genentech / jmpost

https://genentech.github.io/jmpost/

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issues

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SurvivalQuantities expects GSF variables when jm.samples are passed

#371 mercifr1 closed 4 months ago
2
Fix SF Quantities

#370 gowerc closed 4 months ago
5
Flow diagram

#369 gowerc closed 4 months ago
3
SF code refers to GSF variables

#368 gowerc closed 4 months ago
0
Vignette on SurvivalOnly model - Part 1 Stat specs

#367 mercifr1 closed 4 months ago
0
Stop deletion of snapshot files

#366 gowerc closed 4 months ago
4
Deleting Unused Snapshots

#365 gowerc closed 4 months ago
1
Defer inclusion of generated quantity code

#364 gowerc closed 4 months ago
4
Rename lt0 -> gte0

#363 gowerc closed 5 months ago
3
Fix number of chains print method

#362 gowerc closed 5 months ago
3
Add toggle for Graph Snapshot Testing

#361 gowerc closed 5 months ago
3
Update Snapshot tests

#360 gowerc closed 5 months ago
3
Convert vignettes to "as-is"

#359 gowerc opened 5 months ago
0
Snapshot tests for JointModel are out of date

#358 gowerc closed 5 months ago
0
Covert growth link to be on log scale

#357 gowerc closed 5 months ago
3
Prints incorrect number of chains for JointModelSamples

#356 gravesti closed 5 months ago
0
SF and GSF should use log growth

#355 gowerc closed 5 months ago
0
Harmonise Simulation and formula parameter values

#354 gowerc closed 5 months ago
3
Implement `GridEvent()`

#353 gowerc closed 5 months ago
3
Add `GridEvent()` quantity generator

#352 gowerc closed 5 months ago
0
Abstract Stan 8000 cap to safety function

#351 gowerc opened 5 months ago
0
Claret Bruno Model

#350 gowerc closed 4 months ago
10
Double check initial values for SF and GSF models

#349 gowerc closed 5 months ago
1
Improve Stan `if_lt0_else` function

#348 gowerc closed 5 months ago
0
Add alternative variance structure

#347 gowerc closed 3 months ago
1
Add Spike and slab prior for Claret-Bruno model

#346 gowerc opened 5 months ago
1
Fix GHA cache model corruption

#345 gowerc opened 5 months ago
0
updated priors for regression coeficients

#344 gowerc closed 5 months ago
4
Remove model cache

#343 gowerc closed 5 months ago
3
Create high level schematic of function flow within jmpost

#342 gowerc closed 4 months ago
0
Set Survival regression priors of the beta coeficients to N(0,2)

#341 gowerc closed 5 months ago
0
Include cmdstan url to description file

#340 gowerc closed 5 months ago
3
Update cmdstandr URL

#339 gowerc closed 5 months ago
3
Implement Claret-Bruno Longitudinal Model

#338 gowerc closed 4 months ago
2
Change the URL checker to lychee

#337 cicdguy closed 5 months ago
3
Fix failing CRON unit tests

#336 gowerc closed 5 months ago
3
removed legacy option

#335 gowerc closed 5 months ago
3
Look into local installation warning message

#334 gowerc closed 5 months ago
2
Fix failed CRON job

#333 gowerc closed 5 months ago
0
Update gauss.quad code to not use undefined variable

#332 gowerc closed 5 months ago
0
Convert "patient" -> "subject"

#331 gowerc closed 5 months ago
3
Implements growth link function

#330 gowerc closed 6 months ago
3
Convert simulation code to use exact numbers rather than approximation

#329 gowerc opened 6 months ago
0
Add documentation for extending the simulation functions

#328 gowerc closed 6 months ago
4
Extend simulation functions to allow for custom covariates

#327 gowerc opened 6 months ago
1
Warnings for StanModules + cleanup

#326 gowerc closed 6 months ago
3
Replace references to "pt" in the simulation functions to "subject"

#325 gowerc closed 5 months ago
1
StanModule error handling

#324 gowerc closed 6 months ago
0
Add details for extending simulation functions

#323 gowerc closed 6 months ago
0
Defer generated quantity code

#322 gowerc closed 4 months ago
0

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