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GenomicMedLab
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dgipy
Python client for fast access to the Drug-Gene Interaction Database (DGIDb)
MIT License
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Capture Recruitment Status in get_clinical_trials()
#85
mcannon068nw
opened
1 day ago
0
feat: declare dgipy client in request header
#84
jsstevenson
closed
1 day ago
0
cicd: fix GH action file
#83
jsstevenson
closed
1 day ago
1
Improve Cytoscape Graph Visualization
#82
rbasu101
opened
1 week ago
0
style: update ruff settings
#81
jsstevenson
closed
1 week ago
0
build!: require python 3.11-13
#80
jsstevenson
closed
1 week ago
0
chore: add issue templates
#79
jsstevenson
closed
1 week ago
0
cicd: update precommit hooks + run checks
#78
jsstevenson
closed
4 days ago
0
chore: add stale action
#77
jsstevenson
closed
4 days ago
0
chore: update gitignore
#76
jsstevenson
closed
4 days ago
0
feat: add cytoscape export
#75
rbasu101
closed
4 days ago
3
fix: handle failed drugs@fda lookups with regbot API
#74
jsstevenson
closed
1 month ago
0
cicd: add more hooks
#73
jsstevenson
closed
1 month ago
0
Image Exporting from Cytoscape Graph
#72
rbasu101
closed
4 days ago
0
feat: integrate cytoscape for graphing
#71
rbasu101
closed
3 weeks ago
0
cicd: use uv for dependencies
#70
jsstevenson
closed
1 month ago
2
feat: create generalized networkx constructor
#69
jsstevenson
closed
1 month ago
0
feat!: make more property names consistent
#68
jsstevenson
closed
2 months ago
0
cicd: update actions revs
#67
jsstevenson
closed
2 months ago
0
feat: standardize data acquisition in queries
#66
jsstevenson
closed
2 months ago
0
chore: use one underscore for private functions
#65
jsstevenson
closed
2 months ago
0
feat!: use consistent function/arg names
#64
jsstevenson
closed
2 months ago
0
Handle failed ANDA/NDA requests
#63
jsstevenson
closed
1 month ago
4
chore: fix EOL
#62
jsstevenson
closed
2 months ago
1
feat!: use dataframe-like structure for query method output
#61
jsstevenson
closed
2 months ago
1
Standardize response data in queries
#60
jsstevenson
closed
2 months ago
0
Move non-dgidb methods out of dgidb module
#59
mcannon068nw
opened
2 months ago
0
feat!: use enum constraints for source type input
#58
jsstevenson
closed
2 months ago
0
Use pagination
#57
jsstevenson
closed
1 month ago
4
cicd: change autoformat action name
#56
jsstevenson
closed
2 months ago
1
cicd: fix autoformat conditions
#55
jsstevenson
closed
2 months ago
1
chore: don't use double underscore for private methods
#54
jsstevenson
closed
2 months ago
0
cicd: autoformat queries
#53
jsstevenson
closed
2 months ago
0
feat: Clinical trials lookup function
#52
mcannon068nw
closed
2 months ago
0
Function to grab trial data from ClinicalTrials.gov
#51
mcannon068nw
closed
2 months ago
1
feat: add drug searches to graph_app
#50
rbasu101
closed
2 months ago
1
feat!: restructure query definitions
#49
jsstevenson
closed
3 months ago
0
cicd: update precommit
#48
jsstevenson
closed
3 months ago
0
style: update ruff version
#47
jsstevenson
closed
3 months ago
0
graph_app drug searches.
#46
rbasu101
closed
2 months ago
0
Neo4j export
#45
jsstevenson
opened
5 months ago
0
Fix for graph_app.py
#44
rbasu101
closed
5 months ago
0
Fix graph_app functionality
#43
rbasu101
closed
5 months ago
0
Update pytest response JSON fixtures
#42
rbasu101
opened
5 months ago
0
Handle 'nan' type searches to avoid errors
#41
mcannon068nw
opened
5 months ago
1
build: require python >= 3.10
#40
jsstevenson
closed
5 months ago
0
feat!: restructure modules
#39
jsstevenson
closed
2 months ago
1
chore: remove editor files
#38
jsstevenson
closed
5 months ago
0
build: use setuptools-scm for version
#37
jsstevenson
closed
5 months ago
0
Vcf annotator base
#36
mcannon068nw
closed
5 months ago
2
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