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GenomicMedLab
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wags-tails
Data acquisition tools for Wagnerds
https://wags-tails.readthedocs.io/stable/
MIT License
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fix(hemonc): ensure most accurate version is captured
#47
jsstevenson
closed
20 hours ago
0
HemOnc acquisition failing - request times out
#46
jsstevenson
closed
1 day ago
2
Support file collections, rather than individual files
#45
jsstevenson
opened
1 month ago
0
feat: add molecular oncology almanac
#44
jsstevenson
closed
1 month ago
0
build: use setuptools-scm to define version
#43
jsstevenson
closed
1 month ago
0
cicd: update precommit
#42
jsstevenson
closed
1 month ago
0
cicd: update templates and action workflows
#41
jsstevenson
closed
1 month ago
0
style: update ruff
#40
jsstevenson
closed
1 month ago
0
build: require python>=3.10
#39
jsstevenson
closed
1 month ago
0
chore: update download_cb type annotation
#38
jsstevenson
closed
1 month ago
0
Document versioning decisions
#37
jsstevenson
opened
1 month ago
0
Add OncoKB
#36
jsstevenson
closed
1 month ago
1
Enable "soft version check" for date-versioned sources
#35
jsstevenson
opened
2 months ago
0
Optionally handle failed version lookups
#34
jsstevenson
opened
4 months ago
0
cicd: require priority label
#33
jsstevenson
closed
6 months ago
0
cicd: update versions
#32
jsstevenson
closed
6 months ago
0
docs: fix tests badge
#31
jsstevenson
closed
6 months ago
0
style: pin Ruff version
#30
jsstevenson
closed
6 months ago
1
docs: add documentation
#29
jsstevenson
closed
6 months ago
0
feat: add Cool-Seq-Tool data
#28
jsstevenson
closed
6 months ago
3
feat!: support unversioned data
#27
jsstevenson
closed
8 months ago
2
style: update ruff rules
#26
jsstevenson
closed
8 months ago
0
Use HTTPS for NCBI files
#25
jsstevenson
opened
8 months ago
0
style: drop black and use latest ruff version
#24
jsstevenson
closed
8 months ago
0
Support static (unversioned) files
#23
jsstevenson
closed
8 months ago
1
CLI tool to download latest version
#22
jsstevenson
opened
9 months ago
1
Prune old data
#21
jsstevenson
opened
9 months ago
0
Select filetype for source
#20
jsstevenson
opened
10 months ago
0
feat!: use mondo OBO release
#19
jsstevenson
closed
10 months ago
0
feat: add Gene Normalizer sources
#18
jsstevenson
closed
10 months ago
0
Custom or configurable cache invalidation logic
#17
jsstevenson
opened
10 months ago
0
Console entry point to print expected data directory
#16
jsstevenson
opened
10 months ago
0
cicd: add release action
#15
jsstevenson
closed
10 months ago
0
Enable storage on S3
#14
jsstevenson
opened
11 months ago
0
feat: add therapy-normalizer data sources
#13
jsstevenson
closed
10 months ago
2
feat!: add disease-normalizer data sources
#12
jsstevenson
closed
11 months ago
0
Add DGIdb sources
#11
jsstevenson
opened
11 months ago
0
Add BioMart
#10
korikuzma
closed
6 months ago
0
Add LRG_RefSeqGene
#9
korikuzma
closed
6 months ago
1
Add MANE summary text
#8
korikuzma
closed
6 months ago
1
Add cool-seq-tool sources
#7
korikuzma
closed
6 months ago
0
Add release action/remaining boilerplate
#6
jsstevenson
closed
10 months ago
1
Add protein domain sources
#5
jsstevenson
opened
11 months ago
0
Add gene sources
#4
jsstevenson
closed
10 months ago
1
Add therapy sources
#3
jsstevenson
closed
10 months ago
0
Add disease sources
#2
jsstevenson
closed
11 months ago
1
feat: Add ChEMBL and Mondo
#1
jsstevenson
closed
11 months ago
0