Closed bede closed 2 years ago
This appears to be an API error, not a gpas-cli issue
(gpas-cli-dev) bede@yoshina gpas-cli % gpas upload --environment staging --token tests/test-data/token-staging.json tests/test-data/cayman.csv INFO: Validation successful INFO: Using 12 processes INFO: Finished decontaminating 1 sample(s) INFO: Saved mapping CSV to D-843ea7fc.mapping.csv INFO: Finished uploading 1 sample(s) Traceback (most recent call last): File "/Users/bede/miniconda3/envs/gpas-cli-dev/bin/gpas", line 33, in <module> sys.exit(load_entry_point('gpas', 'console_scripts', 'gpas')()) File "/Users/bede/Research/Git/gpas-cli/src/gpas/cli.py", line 249, in main defopt.run( File "/Users/bede/miniconda3/envs/gpas-cli-dev/lib/python3.10/site-packages/defopt.py", line 275, in run return func(*ba.args, **ba.kwargs) File "/Users/bede/Research/Git/gpas-cli/src/gpas/cli.py", line 115, in upload_wrapper jsonify_exceptions( File "/Users/bede/Research/Git/gpas-cli/src/gpas/misc.py", line 117, in jsonify_exceptions return function(**kwargs) File "/Users/bede/Research/Git/gpas-cli/src/gpas/cli.py", line 88, in upload batch.upload(dry_run=dry_run) File "/Users/bede/Research/Git/gpas-cli/src/gpas/lib.py", line 824, in upload self._submit() File "/Users/bede/Research/Git/gpas-cli/src/gpas/lib.py", line 761, in _submit self._finalise_submission() File "/Users/bede/Research/Git/gpas-cli/src/gpas/lib.py", line 742, in _finalise_submission raise misc.SubmissionError(r.json().get("errorMsg")) gpas.misc.SubmissionError: Error occurred creating samples: Invalid sample country: CYM
Confirmed upstream https://oc-collab.gc3.ocs.oraclecloud.com/browse/C900000008-802
Fixed upstream
This appears to be an API error, not a gpas-cli issue