doseplot
contains cnetplot
and enrichMap
functions for enrichResult
object. These two functions were re-implemented in enrichplot
package as cnetplot
and emapplot
functions. All other plot functions previous implemented in DOSE
were moved to enrichplot
.
This package is just a backup of the old implementation of cnetplot
and enrichMap
functions.
require(DOSE)
data(geneList)
de = names(geneList)[1:100]
x = enrichDO(de)
require(doseplot)
cnetplot(x)
enrichMap(x)