GuipengLi ChIA-PET2 issues

GuipengLi / ChIA-PET2

a versatile and flexible pipeline for analysing different variants of ChIA-PET data

GNU General Public License v3.0

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issues

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macs2 callpeaks

#31 zhanglp996 opened 2 years ago
0
bedpe2Interaction core dumped

#30 hugch2020 closed 2 years ago
2
Sam file is not written

#29 ahmedabbas81 opened 3 years ago
2
MICC error: there is no package called 'VGAM'

#28 bioinfo89 opened 3 years ago
4
Truncated .tag.sort file error: rmdup.bedpe.tag.sorted has 3 fields, but 6 were expected.

#27 bioinfo89 opened 3 years ago
1
Solution to ld missing -lz during make

#26 solo7773 opened 3 years ago
0
ERROR: The input file is neither a BAM file nor a SAM file.

#25 bioinfo89 opened 3 years ago
0
need remove -sorted in the latest version of bedtools

#24 fengpku opened 4 years ago
0
Runnung Error in Step2,input error

#23 HCMY opened 5 years ago
1
How can we get the significant Interactions?

#22 MamushChu closed 5 years ago
4
MayBe error for the main bedpe2Phased

#21 ZhangLab77 opened 5 years ago
2
bug in trimLinker -h

#20 fengpku opened 5 years ago
3
error when run MICC.R

#19 liencau opened 5 years ago
8
BWA issue

#18 yhx-tj closed 5 years ago
0
Remove compiled files from the git repository

#17 rakarnik opened 6 years ago
0
extend parameter not used?

#16 rakarnik closed 6 years ago
2
std::bad_alloc error

#15 RubD closed 6 years ago
4
stopped at 4th stage

#14 rayezh closed 6 years ago
3
enough confident interactions to learn the model

#13 rayezh closed 6 years ago
3
Download ChIA-PET2.tar.gz Url

#12 tatafu closed 6 years ago
5
Unable to start CPT2

#11 IoannisVardaxis opened 6 years ago
10
keep empty

#10 werhoog opened 6 years ago
7
Read names of PET ends do not match

#9 MERobinson closed 6 years ago
2
'm' parameter of this tool

#8 gunjangala closed 6 years ago
2
TrimLinker slow?

#7 rakarnik closed 7 years ago
1
BWA alignment issue

#6 zentnerlab closed 7 years ago
2
ERROR in running bwa

#5 tiagochst closed 7 years ago
7
Cannot be installed on OS X EI Capitan

#4 faustson opened 7 years ago
3
Error: Don't have enough confident interactions to learn the model

#3 titosand closed 8 years ago
15
Move LDFLAGS to end

#2 titosand closed 8 years ago
1
Unable to install ChIA-PET2 in Ubuntu 15.10

#1 chadi-elfarran closed 8 years ago
3