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HallLab
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pandas-genomics
Pandas ExtensionDtypes for dealing with genomics data
BSD 3-Clause "New" or "Revised" License
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hall-lab.org points to a gambling website
#33
nschan
opened
1 month ago
1
numpy.core.multiarray failed to import
#32
disadone
closed
1 year ago
1
Allow for multiple outcomes when calculating alphas
#31
tomszar
opened
2 years ago
0
Implement multiprocessing
#30
tomszar
opened
2 years ago
0
Adding intercept for alpha estimation
#29
tomszar
closed
3 years ago
1
keep the intercept for edge alpha estimation
#28
tomszar
closed
3 years ago
0
Alpha values for EDGE encoding are not correct
#27
tomszar
closed
3 years ago
2
Version 0.11.0 : Add Region
#26
jrm5100
closed
3 years ago
0
Version 0.10.0
#25
jrm5100
closed
3 years ago
1
Version 0.6.1
#24
jrm5100
closed
3 years ago
0
Random genotypes: Add an easier way to specify allele frequency
#23
jrm5100
closed
3 years ago
0
DataFrame Accessor doesn't require all-Genotype columns
#22
jrm5100
closed
3 years ago
1
Update numpy version requirement to make compatible with clarite
#21
jrm5100
closed
3 years ago
1
Support Arrow
#20
jrm5100
opened
3 years ago
0
9 improved accessor
#19
jrm5100
closed
3 years ago
1
Additional QC Methods for Accessors
#18
jrm5100
opened
3 years ago
0
Encoding: Assume bialleleic and treat all alternate variants as the minor/encoded allele
#17
jrm5100
closed
3 years ago
0
Variant ID considerations
#16
jrm5100
closed
3 years ago
1
Add simple Genotype Comparison
#15
jrm5100
opened
3 years ago
0
Add bialleleic simulation
#14
jrm5100
closed
3 years ago
1
Replicate Plink Tutorial
#13
jrm5100
opened
3 years ago
0
Speed up plink loading by 3x-4x
#12
jrm5100
closed
3 years ago
0
Support Plink2 FIle Formats
#11
jrm5100
opened
3 years ago
0
Create a Plink fam file Index
#10
jrm5100
opened
3 years ago
0
Add additional methods/properties to DataFrame Accessor
#9
jrm5100
closed
3 years ago
0
5 df accessor
#8
jrm5100
closed
3 years ago
1
Multiple improvements
#7
jrm5100
closed
3 years ago
0
4 ploidy
#6
jrm5100
closed
4 years ago
1
Genotype DataFrame Accessor
#5
jrm5100
closed
3 years ago
1
Account for Ploidy
#4
jrm5100
closed
4 years ago
0
Add EDGE encoding
#3
jrm5100
closed
3 years ago
2
Readme pyproject update
#2
jrm5100
closed
4 years ago
0
Add encoding methods
#1
jrm5100
closed
4 years ago
1