Motivation

The goal of BiocSpatialChallenges is to host challenges contributed by and for the Bioconductor community in the context of spatially resolved transcriptomics data.

While infrastructure and workflows for spatially resolved transcriptomics data analysis are already available elsewhere, we hope to develop tools that interact nicely with already existent Bioconductor infrastructure - as a community!

Structure

• Each challenge is a stand-alone .Rmd file, located in the vignettes/challenges directory
• Challenges are rated at one of three levels of difficulty: novice, intermediate, advanced
• Ideally, a challenge should be linked to a GitHub issue in an already existent package/repository

Website

• link to pkgdown website: https://helenalc.github.io/BiocSpatialChallenges

BiocChallenges

This project is inspired to the main project BiocChallenges and it could be merged into it in the future.