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HelmholtzAI-Consultants-Munich
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napari-organoid-counter
A napari plugin for counting organoids from brightfield microscopy images with deep learning
MIT License
9
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2
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Mmdet model
#27
christinab12
closed
1 month ago
0
Add check for c in _orgacount update_next_id
#26
christinab12
opened
9 months ago
0
Fix dependencies
#25
christinab12
closed
9 months ago
0
Update dependencies?
#24
goanpeca
closed
9 months ago
1
Update to use qtpy imports
#23
goanpeca
closed
9 months ago
1
Try segmentation of organoids with celldetector on bboxes
#22
christinab12
opened
1 year ago
0
changed test to run faster
#21
christinab12
closed
1 year ago
0
Editable text boxes
#20
christinab12
closed
1 year ago
0
OrganoiDL class should exist and be able to add new shapes layers w/o model run
#19
christinab12
closed
1 year ago
1
Downsampling and window size
#18
IsraMekki0
opened
1 year ago
0
Code review
#17
christinab12
closed
1 year ago
0
Christinab12 fixes from user testing
#16
christinab12
closed
1 year ago
0
Group layer list pairs (image+label)
#15
christinab12
opened
1 year ago
0
Add toy data
#14
christinab12
opened
1 year ago
0
Add help boxes to explain user tunable parameters
#13
christinab12
closed
1 year ago
1
Window freezes and becomes unresponsive while run button is clicked
#12
christinab12
closed
1 year ago
1
bunch of UX issues / lack of user feedback / freezes / documentation
#11
neuronflow
closed
1 year ago
3
Docs: Explanation of Window sizes and downsampling
#10
Theresa-S
closed
1 year ago
2
Detection outside of image
#9
Theresa-S
opened
1 year ago
1
Manual entering of parameters
#8
Theresa-S
closed
1 year ago
1
Export data without empty lines
#7
Theresa-S
opened
1 year ago
1
merging dev-v.0.2 branch
#6
christinab12
closed
1 year ago
0
Strange thickness of the bounding boxes
#5
Theresa-S
closed
1 year ago
3
Information on output
#4
Theresa-S
closed
1 year ago
5
Make repository public
#3
haesleinhuepf
closed
2 years ago
1
Organoid counter not working
#2
elifozcelik
closed
1 year ago
2
Cannot install napari organoid counter as a plugin
#1
elifozcelik
closed
2 years ago
1