HelmholtzAI-Consultants-Munich / oligo-designer-toolsuite

Develop custom oligo design pipelines.
https://oligo-designer-toolsuite.readthedocs.io/en/latest/
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Filter for Isoform Consensus #69

Closed lisa-sousa closed 1 month ago

lisa-sousa commented 3 months ago

Implement a filter that checks the isoform consensus of oligos. Isoform consensus can range from 0 (present in only one isoform) to 100% (present in all isoforms). The calculation of the isoform consensus is dependent on the transcript information and number of total transcripts per gene information from the processed fasta file. If this information is not present, then the isoform conses cannot be calculated.