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ICB-DCM
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PESTO
PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
https://doi.org/10.1093/bioinformatics/btx676
BSD 3-Clause "New" or "Revised" License
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Parallel mode in getMultiStarts in MATLAB
#201
aidinbii
opened
1 year ago
0
plotParameterProfiles figure
#200
aidinbii
opened
1 year ago
0
hotfix in DHC when runnning over non existing options
#199
paulstapor
closed
4 years ago
0
Hyperlink DOIs to preferred resolver
#198
katrinleinweber
closed
4 years ago
0
Negative parameter-limits (parameters.min and parameters.max)
#197
Tim212019
opened
4 years ago
5
update documentation for HOOptions
#196
LoosC
closed
5 years ago
0
Update citation of PESTO in description
#195
LoosC
opened
5 years ago
0
Hierarchical likelihood with only absolute measurements
#194
LoosC
opened
5 years ago
0
getParameterProfiles produces error when fixed parameters are incorporated
#193
kjnousia
closed
5 years ago
1
generate folder only if save flag is true
#192
LoosC
closed
5 years ago
1
Minor improvement for the Hessian in the hierarchical case in terms o…
#191
paulstapor
closed
5 years ago
0
fixed Chen model
#190
elbaraim
closed
5 years ago
3
remove 'lower' in PTOptions and RAMPARTOptions
#189
LoosC
opened
6 years ago
0
Bugfix PT
#188
LoosC
closed
6 years ago
0
citation added
#187
JanHasenauer
closed
6 years ago
0
Hierarchical Optimization add paths automatically
#186
LoosC
closed
6 years ago
0
Bugfix Hierarchical Optimization
#185
LoosC
closed
6 years ago
0
No "Last Error in" output
#184
yannikschaelte
opened
6 years ago
0
Fixes yannik
#183
yannikschaelte
closed
6 years ago
0
Fmincon Default Options
#182
yannikschaelte
closed
6 years ago
0
fixed naming in confidence interval routines
#181
paulstapor
closed
6 years ago
0
paper citation
#180
thomassligon
closed
6 years ago
1
sol.xdot -> sol.diagnosis.xdot, fixes #178
#179
yannikschaelte
closed
6 years ago
0
Pom1 broken
#178
yannikschaelte
closed
6 years ago
1
Hierarchical Optimization Revision
#177
LoosC
closed
6 years ago
0
fix due to new Hessian Option
#176
paulstapor
closed
6 years ago
0
Option no hessian
#175
paulstapor
closed
6 years ago
0
Fix multistart failure
#174
paulstapor
closed
6 years ago
0
Wrong size of hessian with fixed parameters
#173
LoosC
closed
6 years ago
0
Parameter Constraints
#172
LoosC
closed
6 years ago
0
BarrierFunction: Hessian
#171
yannikschaelte
opened
6 years ago
0
preliminary for foldername, #169
#170
yannikschaelte
closed
6 years ago
0
options.save folder name unsupported on windows
#169
yannikschaelte
closed
6 years ago
3
Hierarchical Optimization: Respect Boundaries
#168
yannikschaelte
opened
6 years ago
2
var. min. error corrects + enhancements wrt. dfo algorithms, integration to pesto
#167
yannikschaelte
closed
6 years ago
0
Bug when options.start_index is set
#166
AnnaFiedler
closed
6 years ago
0
possibility to append parameter.MS struct
#165
AnnaFiedler
opened
6 years ago
0
uniform as new default proposal
#164
AnnaFiedler
opened
6 years ago
1
Removed redundant code for PT / Minor figure handle fix
#163
BBallnus
closed
6 years ago
0
fixes #155
#162
yannikschaelte
closed
6 years ago
0
Fix multistart failure
#161
paulstapor
closed
6 years ago
0
Poor Optimization Initializations lead to error
#160
BBallnus
closed
6 years ago
2
Standard options
#159
yannikschaelte
opened
6 years ago
0
'Warning: Imaginary parts of complex X and/or Y arguments ignored' in plotParameterUncertainty (line 277)
#158
FFroehlich
opened
6 years ago
0
corrupted `init.mat` when running profile calculation in parallel.
#157
FFroehlich
opened
6 years ago
0
code divergence in getMultiStarts
#156
FFroehlich
closed
6 years ago
1
Pom example not up to date
#155
yannikschaelte
closed
6 years ago
0
Create a function for figure generation
#154
paulstapor
opened
6 years ago
0
Restructure Pesto as Matlab package?
#153
paulstapor
opened
6 years ago
7
Interface to Lsqnonlin
#152
paulstapor
opened
6 years ago
0
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