ICB-DCM / pyPESTO

python Parameter EStimation TOolbox
https://pypesto.readthedocs.io
BSD 3-Clause "New" or "Revised" License
216 stars 47 forks source link

Disentangle amici and roadrunner #1429

Closed PaulJonasJost closed 1 month ago

PaulJonasJost commented 1 month ago

When installing only pypesto[roadrunner], there are additional amici dependencies, mainly occurring in hierarchical (basically all of them typings, thus fixed through string type annotation)

codecov-commenter commented 1 month ago

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Codecov Report

Attention: Patch coverage is 80.00000% with 2 lines in your changes missing coverage. Please review.

Project coverage is 83.33%. Comparing base (439c8ac) to head (0b044b1).

Files Patch % Lines
pypesto/hierarchical/ordinal/solver.py 0.00% 1 Missing :warning:
pypesto/petab/__init__.py 0.00% 1 Missing :warning:

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #1429 +/- ## ======================================== Coverage 83.32% 83.33% ======================================== Files 161 161 Lines 13237 13243 +6 ======================================== + Hits 11030 11036 +6 Misses 2207 2207 ```

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