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IHEC
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ihec-ecosystems
This repo is for code and documentation associated with the ihec-ecosystems working group
Apache License 2.0
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Fix relative path for all schemas
#83
zxenia
closed
4 years ago
7
UMI ChIP support
#82
sitag
closed
3 years ago
4
Versioning SOP
#81
dzerbino
closed
4 years ago
2
Versioning SOP
#80
dzerbino
closed
4 years ago
0
Remove repeating colon 1.0/experiment.json
#79
zxenia
closed
4 years ago
0
Required attribs overconversion control
#78
dzerbino
closed
4 years ago
0
Arrayed overconversion control
#77
dzerbino
closed
4 years ago
1
Jan2020
#76
sitag
closed
4 years ago
0
Revert "Removed CURIEs from v1.0 format, addresses #71"
#75
sitag
closed
4 years ago
0
Removed CURIEs from v1.0 format, addresses #71
#74
dzerbino
closed
4 years ago
1
Molecule type
#73
dzerbino
closed
4 years ago
2
Sample attributes required?
#72
dzerbino
closed
4 years ago
7
CURIE in V1.0?
#71
dzerbino
closed
4 years ago
6
Jan2020
#70
sitag
closed
4 years ago
0
Overconversion control
#69
sitag
closed
4 years ago
0
Jan2020
#68
sitag
closed
4 years ago
0
Small fix: Change molecule_ontology_curie type to 'array'
#67
zxenia
closed
4 years ago
2
Curie arrays
#66
dzerbino
closed
4 years ago
3
QC Flags
#65
dzerbino
closed
4 years ago
1
Validator error report improvement: Missing experiment_ontology_uri & experiment_type
#64
juettemann
closed
4 years ago
3
Removed format:md5 from dataset.json schema since this is not a recognized format.
#63
DavidBrownlee
closed
4 years ago
0
Specify pip3 rather than generic pip to avoid release version errors.
#62
DavidBrownlee
closed
4 years ago
0
Outreach plan
#61
dzerbino
closed
2 years ago
3
Overconversion control + functional versioning + fix #49
#60
sitag
closed
4 years ago
22
Spec versioning SOP
#59
dzerbino
closed
4 years ago
0
Tracking over conversion control for WGBS experiments
#58
dzerbino
closed
4 years ago
0
python3 + verbose errors
#57
sitag
closed
5 years ago
0
Added requests library to avoid dependency errors.
#56
DavidBrownlee
closed
5 years ago
5
Update README.md for primary track type
#55
zxenia
closed
5 years ago
0
pull @zxenia's changes into xml validator dev branch
#54
sitag
closed
5 years ago
0
Log unicode string
#53
yunhailuo
closed
5 years ago
5
Update expected schema path from #43
#52
yunhailuo
closed
5 years ago
1
Potential bug from #43
#51
yunhailuo
closed
5 years ago
3
Unified submission
#50
dbujold
opened
5 years ago
7
ChIP-Input experiments not validating
#49
sitag
closed
4 years ago
9
Ontology validation
#48
zxenia
closed
4 years ago
5
Ontology choice for biomaterial_type = "Primary Cell Culture"
#47
dbujold
closed
4 years ago
15
Adding submission SOP
#46
dzerbino
closed
5 years ago
3
Submission SOP
#45
dzerbino
closed
5 years ago
0
Confusion between portal and XML schemas
#44
dzerbino
closed
5 years ago
0
Moved all the Portal and XML validators into a central location
#43
dzerbino
closed
5 years ago
5
Validate EpiRR record if 'experiment_type' is not present
#42
zxenia
closed
4 years ago
18
Update validator reports + HGNC validation
#41
zxenia
closed
5 years ago
9
Adding biological replicates to sample description
#40
dzerbino
closed
4 years ago
9
Created basic SOP
#39
dzerbino
closed
5 years ago
4
Spec update SOP
#38
dzerbino
closed
5 years ago
1
Replacing URIs with CURIEs in spec and schema
#37
dzerbino
closed
4 years ago
5
Cryptic validator reports
#36
dzerbino
closed
4 years ago
0
User testing of submission process
#35
dzerbino
closed
2 years ago
4
Mirror 1.0 spec
#34
sitag
closed
5 years ago
2
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