IKIM-Essen / uncovar

Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.

https://ikim-essen.github.io/uncovar

BSD 2-Clause "Simplified" License

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Closed ka-block closed 5 months ago

ka-block commented 1 year ago

Description

[ ] I've formatted the PR title in accordance with the structure of the conventional commit messages.
[ ] I've updated the code style using pre-commit if needed.
[ ] I've updated or supplemented the documentation as needed.
[ ] I've read the CODE_OF_CONDUCT.md document.
[ ] I've read the CONTRIBUTING.md guide.

johanneskoester commented 1 year ago

What will be the final output of this? A table? If so, it would make sense to use datavzrd for it.

ka-block commented 1 year ago

The final output will either be a table or a plot, but its still up for discussion. Thanks for the suggestion, I will have a closer look.