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IKIM-Essen / uncovar

Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.
https://ikim-essen.github.io/uncovar
BSD 2-Clause "Simplified" License
21 stars 8 forks source link

chore(deps): bump super-linter/super-linter from 5.7.2 to 6.3.1 #641

Closed dependabot[bot] closed 7 months ago

dependabot[bot] commented 8 months ago

Bumps super-linter/super-linter from 5.7.2 to 6.3.1.

Release notes

Sourced from super-linter/super-linter's releases.

v6.3.1

6.3.1 (2024-04-04)

🐛 Bugfixes

⬆️ Dependency updates

  • bundler: bump rubocop from 1.60.2 to 1.61.0 in /dependencies (#5359) (20da02a)
  • bundler: bump rubocop from 1.61.0 to 1.62.1 in /dependencies (#5372) (22debee)
  • bundler: bump rubocop-minitest in /dependencies (#5371) (8974415)
  • bundler: bump rubocop-rails from 2.23.1 to 2.24.0 in /dependencies (#5358) (dceea3d)
  • bundler: bump rubocop-rspec from 2.26.1 to 2.27.1 in /dependencies (#5360) (630d44b)
  • bundler: bump standard from 1.34.0 to 1.35.1 in /dependencies (#5426) (69cc492)
  • dev-docker: bump node in /dev-dependencies (#5390) (4650e8e)
  • dev-npm: bump @​commitlint/cli in /dev-dependencies (#5396) (b34674f)
  • dev-npm: bump @​commitlint/config-conventional in /dev-dependencies (#5395) (a79e071)
  • dev-npm: bump release-please in /dev-dependencies (#5394) (10b5245)
  • docker: bump alpine/terragrunt from 1.7.4 to 1.7.5 (#5389) (a72dd13)
  • docker: bump clj-kondo/clj-kondo (#5388) (81ab1ad)
  • docker: bump dart from 3.3.0-sdk to 3.3.1-sdk (#5368) (d21db8d)
  • docker: bump golang from 1.22.0-alpine to 1.22.1-alpine (#5366) (63a458f)
  • docker: bump hashicorp/terraform from 1.7.4 to 1.7.5 (#5387) (abfcf4e)
  • docker: bump koalaman/shellcheck from v0.9.0 to v0.10.0 (#5365) (4f182d7)
  • docker: bump yoheimuta/protolint from 0.47.6 to 0.49.3 (#5386) (5fcd592)
  • github-actions: bump actions/download-artifact from 4.1.2 to 4.1.4 (#5361) (af522a6)
  • github-actions: bump akhilerm/tag-push-action from 2.1.0 to 2.2.0 (#5392) (156d046)
  • github-actions: bump docker/login-action from 3.0.0 to 3.1.0 (#5391) (9ad7a43)
  • java: bump com.google.googlejavaformat:google-java-format (#5364) (cb595ba)
  • java: bump com.pinterest.ktlint:ktlint-cli in /dependencies/ktlint (#5354) (a40f1d8)
  • java: bump com.puppycrawl.tools:checkstyle (#5355) (25e8c22)
  • java: bump com.puppycrawl.tools:checkstyle (#5393) (93ba832)
  • npm: bump @​ibm/tekton-lint in /dependencies (#5408) (a07571a)
  • npm: bump @​react-native/eslint-config in /dependencies (#5417) (6e35bed)
  • npm: bump @​typescript-eslint/eslint-plugin in /dependencies (#5352) (4b99bb9)
  • npm: bump @​typescript-eslint/eslint-plugin in /dependencies (#5418) (c312285)
  • npm: bump eslint-plugin-jsonc in /dependencies (#5420) (ed2d6a4)
  • npm: bump eslint-plugin-react in /dependencies (#5351) (b801d8d)
  • npm: bump eslint-plugin-react in /dependencies (#5406) (3ebbbf7)
  • npm: bump eslint-plugin-vue from 9.22.0 to 9.23.0 in /dependencies (#5397) (41af8fc)
  • npm: bump next from 14.1.0 to 14.1.1 in /dependencies (#5353) (a5c0d35)
  • npm: bump next from 14.1.1 to 14.1.3 in /dependencies (#5377) (34bd610)
  • npm: bump npm-groovy-lint from 14.2.2 to 14.2.3 in /dependencies (#5346) (fa9b638)
  • npm: bump npm-groovy-lint from 14.2.3 to 14.2.4 in /dependencies (#5410) (49efd84)
  • npm: bump react-router-dom from 6.22.1 to 6.22.2 in /dependencies (#5349) (770c355)

... (truncated)

Changelog

Sourced from super-linter/super-linter's changelog.

6.3.1 (2024-04-04)

🐛 Bugfixes

⬆️ Dependency updates

  • bundler: bump rubocop from 1.60.2 to 1.61.0 in /dependencies (#5359) (20da02a)
  • bundler: bump rubocop from 1.61.0 to 1.62.1 in /dependencies (#5372) (22debee)
  • bundler: bump rubocop-minitest in /dependencies (#5371) (8974415)
  • bundler: bump rubocop-rails from 2.23.1 to 2.24.0 in /dependencies (#5358) (dceea3d)
  • bundler: bump rubocop-rspec from 2.26.1 to 2.27.1 in /dependencies (#5360) (630d44b)
  • bundler: bump standard from 1.34.0 to 1.35.1 in /dependencies (#5426) (69cc492)
  • dev-docker: bump node in /dev-dependencies (#5390) (4650e8e)
  • dev-npm: bump @​commitlint/cli in /dev-dependencies (#5396) (b34674f)
  • dev-npm: bump @​commitlint/config-conventional in /dev-dependencies (#5395) (a79e071)
  • dev-npm: bump release-please in /dev-dependencies (#5394) (10b5245)
  • docker: bump alpine/terragrunt from 1.7.4 to 1.7.5 (#5389) (a72dd13)
  • docker: bump clj-kondo/clj-kondo (#5388) (81ab1ad)
  • docker: bump dart from 3.3.0-sdk to 3.3.1-sdk (#5368) (d21db8d)
  • docker: bump golang from 1.22.0-alpine to 1.22.1-alpine (#5366) (63a458f)
  • docker: bump hashicorp/terraform from 1.7.4 to 1.7.5 (#5387) (abfcf4e)
  • docker: bump koalaman/shellcheck from v0.9.0 to v0.10.0 (#5365) (4f182d7)
  • docker: bump yoheimuta/protolint from 0.47.6 to 0.49.3 (#5386) (5fcd592)
  • github-actions: bump actions/download-artifact from 4.1.2 to 4.1.4 (#5361) (af522a6)
  • github-actions: bump akhilerm/tag-push-action from 2.1.0 to 2.2.0 (#5392) (156d046)
  • github-actions: bump docker/login-action from 3.0.0 to 3.1.0 (#5391) (9ad7a43)
  • java: bump com.google.googlejavaformat:google-java-format (#5364) (cb595ba)
  • java: bump com.pinterest.ktlint:ktlint-cli in /dependencies/ktlint (#5354) (a40f1d8)
  • java: bump com.puppycrawl.tools:checkstyle (#5355) (25e8c22)
  • java: bump com.puppycrawl.tools:checkstyle (#5393) (93ba832)
  • npm: bump @​ibm/tekton-lint in /dependencies (#5408) (a07571a)
  • npm: bump @​react-native/eslint-config in /dependencies (#5417) (6e35bed)
  • npm: bump @​typescript-eslint/eslint-plugin in /dependencies (#5352) (4b99bb9)
  • npm: bump @​typescript-eslint/eslint-plugin in /dependencies (#5418) (c312285)
  • npm: bump eslint-plugin-jsonc in /dependencies (#5420) (ed2d6a4)
  • npm: bump eslint-plugin-react in /dependencies (#5351) (b801d8d)
  • npm: bump eslint-plugin-react in /dependencies (#5406) (3ebbbf7)
  • npm: bump eslint-plugin-vue from 9.22.0 to 9.23.0 in /dependencies (#5397) (41af8fc)
  • npm: bump next from 14.1.0 to 14.1.1 in /dependencies (#5353) (a5c0d35)
  • npm: bump next from 14.1.1 to 14.1.3 in /dependencies (#5377) (34bd610)
  • npm: bump npm-groovy-lint from 14.2.2 to 14.2.3 in /dependencies (#5346) (fa9b638)
  • npm: bump npm-groovy-lint from 14.2.3 to 14.2.4 in /dependencies (#5410) (49efd84)
  • npm: bump react-router-dom from 6.22.1 to 6.22.2 in /dependencies (#5349) (770c355)
  • npm: bump react-router-dom from 6.22.2 to 6.22.3 in /dependencies (#5373) (0e6d8ff)

... (truncated)

Commits
  • 92e2606 chore(main): release 6.3.1 (#5340)
  • 39edf76 fix: do not print the whole environment (#5473)
  • 6842e2d build(docker): update psscript analyzer to 1.22.0 (#5428)
  • b00466d fix: remove cpanm cache (#5385)
  • 3ec9980 deps(python): bump snakemake from 8.5.3 to 8.9.0 in /dependencies/python (#5425)
  • 69cc492 deps(bundler): bump standard from 1.34.0 to 1.35.1 in /dependencies (#5426)
  • abfcf4e deps(docker): bump hashicorp/terraform from 1.7.4 to 1.7.5 (#5387)
  • 4b38d74 deps(python): bump mypy from 1.8.0 to 1.9.0 in /dependencies/python (#5380)
  • 93ba832 deps(java): bump com.puppycrawl.tools:checkstyle (#5393)
  • ed2d6a4 deps(npm): bump eslint-plugin-jsonc in /dependencies (#5420)
  • Additional commits viewable in compare view


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dependabot[bot] commented 7 months ago

A newer version of super-linter/super-linter exists, but since this PR has been edited by someone other than Dependabot I haven't updated it. You'll get a PR for the updated version as normal once this PR is merged.

alethomas commented 7 months ago

@dependabot recreate

dependabot[bot] commented 7 months ago

Superseded by #648.