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IKIM-Essen / uncovar

Transparent and robust SARS-CoV-2 variant calling and lineage assignment with comprehensive reporting.
https://ikim-essen.github.io/uncovar
BSD 2-Clause "Simplified" License
21 stars 8 forks source link

keep until https://github.com/bioconda/bioconda-recipes/pull/42192 and we can pin to 4.3.1 above... #670

Open github-actions[bot] opened 1 month ago

github-actions[bot] commented 1 month ago

https://github.com/IKIM-Essen/uncovar/blob/b8c5c449f81ba9c08bcdb68a099318eca1e64066/workflow/envs/pangolin.yaml#L7


  - nodefaults
dependencies:
  - pangolin =4.3
  - snakemake-minimal=7.24.0 # TODO keep until https://github.com/bioconda/bioconda-recipes/pull/42192 and we can pin to 4.3.1 above