Imageomics char-sim issues - Githubissues

Imageomics / char-sim

Pipeline to create model for comparing character state descriptions including ontology similarity

MIT License

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add rule demonstrating presence/absence of duplicate character descriptions

#9 balhoff opened 3 weeks ago
1
add snakemake rule(s) handling training

#8 balhoff opened 3 weeks ago
1
add snakemake rule(s) handling data splits

#7 balhoff opened 3 weeks ago
1
document source of Phenoscape data in data card

#6 balhoff opened 3 weeks ago
0
Added a simple rule for executing pytorch in conda environment. (fix #3)

#5 KSoumya opened 4 weeks ago
13
embed_model/train_mpnet_v2.py added to enable logging intermediate results and sparql scripts added to filter out noisy terms before the pairwise data is generated.

#4 KSoumya closed 1 month ago
0
add simple rule that utilizes a conda environment

#3 balhoff opened 1 month ago
1
scripts to finetune and evaluate llm on trait data

#2 KSoumya closed 3 months ago
0
Initial snakemake rules to compute similarity.

#1 balhoff closed 4 months ago
1