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ImagingDataCommons
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idc-index
Python package to simplify access to the data available from NCI Imaging Data Commons
https://idc-index.readthedocs.io/
MIT License
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ENH: update idc-index-data to add AdmittingDiagnosis
#136
fedorov
closed
1 week ago
0
Multi-threaded downloads
#135
Dengjun21
closed
1 week ago
2
Improve clinical support
#134
fedorov
closed
2 weeks ago
0
Reuse indices and related data if already downloaded
#133
fedorov
opened
2 weeks ago
0
ENH: download clinical data files if clinical_index is requested
#132
fedorov
closed
2 weeks ago
0
ENH: update to idc-index-data 19.0.2
#131
fedorov
closed
2 weeks ago
0
ENH: support download by crdc_series_uuid
#130
fedorov
closed
2 weeks ago
1
Added column descriptions
#129
DanielaSchacherer
closed
1 month ago
2
Update download functions/tools to support selection by IDs/UIDs from prior versions
#128
fedorov
opened
1 month ago
2
Can we make platform-specific binaries for the command-line scripts?
#127
fedorov
opened
1 month ago
0
Documentation of the underlying index tables
#126
fedorov
opened
1 month ago
9
Revisit queries to allow upgrade to 1.1.0 and beyond
#125
fedorov
opened
1 month ago
0
ENH: update to IDC v19
#124
fedorov
closed
1 month ago
1
DuckDB Catalog Error
#123
surajpaib
closed
1 month ago
1
Add `idc describe` command
#122
fedorov
opened
1 month ago
0
ENH: do not start download if not enough space
#121
fedorov
closed
1 month ago
0
ENH: simplify download and create destination directory if needed
#120
fedorov
closed
1 month ago
0
BUG: remove notebook comitted by accident from Colab
#119
fedorov
closed
2 months ago
0
BUG: fix viewer series selection parameter
#118
fedorov
closed
2 months ago
2
Allow download by `crdc_series_uuid`
#117
fedorov
closed
2 weeks ago
0
BUG: use trim to remove any extraneous spaces while parsing s3 url in manifest
#116
vkt1414
closed
2 months ago
1
Download fails for a manifest that works with s5cmd
#115
fedorov
closed
2 months ago
0
BUG: fixed sql_query function to work with multiple indices
#114
DanielaSchacherer
closed
2 months ago
7
Implementation of instance-level download
#113
DanielaSchacherer
closed
2 weeks ago
8
Implementation of instance-level download
#112
DanielaSchacherer
closed
2 months ago
1
ENH: add clinical_index
#111
fedorov
closed
2 months ago
0
fix: s5cmd sync logic
#110
vkt1414
closed
4 weeks ago
0
ENH: fix error messages for items not identified in the current version
#109
fedorov
closed
2 months ago
0
feat: enable downloading data from previous idc data versions
#108
vkt1414
closed
2 months ago
0
Revisit location for installing additional parquet index files
#107
fedorov
opened
2 months ago
1
DOC: add cli submodule to the docs
#106
fedorov
opened
2 months ago
1
ENH: improve error reporting for unrecognized items from the manifest
#105
fedorov
closed
2 months ago
0
enh: add contributing guidelines
#104
fedorov
closed
3 months ago
0
enh: update idc-index-data to 18.1.0
#103
fedorov
closed
3 months ago
0
Allow selection of AWS vs GCP as a source
#102
ahmedhosny
opened
3 months ago
5
list_indices and fetch_index implemented
#101
DanielaSchacherer
closed
2 months ago
23
Support download of manifests that refer to prior IDC versions
#100
fedorov
opened
3 months ago
20
Add IDCClient() singleton feature
#99
LennyN95
closed
3 months ago
6
feat: add --dir-template argument to cli entrypoints
#98
LennyN95
closed
3 months ago
3
Add support for download of single instances instead of whole series
#97
DanielaSchacherer
closed
2 weeks ago
13
enh: add zero parameter download cli
#96
fedorov
closed
3 months ago
0
enh: add double quotes before paths so spaced paths can work
#95
vkt1414
closed
4 months ago
1
Support array of items in addition to list
#94
fedorov
opened
4 months ago
0
fix: convert the array to list in download instructions
#93
vkt1414
closed
4 months ago
1
Tried to use tutorial from the Pypy page and came up with error
#92
oohtmeel1
closed
4 months ago
4
Unable to download from manifest produced with IDC Portal
#91
fedorov
closed
5 months ago
1
Switch to offline citation generation
#90
fedorov
opened
5 months ago
0
bug: fix race condition
#89
fedorov
closed
5 months ago
0
update readme tutorial section
#88
fedorov
closed
5 months ago
0
doc: update readme and add index column description
#87
fedorov
closed
5 months ago
0
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