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Immortalin / peptide-shaker

Automatically exported from code.google.com/p/peptide-shaker
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Amino acid J not supported #13

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
> What steps will reproduce the problem?
During import of identifications, the error "amino acid not supported" shows up.

> What is the expected output? What do you see instead?
Guess, J stands for Isoleucine or Leucine as a wildcard in some FASTA files. 
Pride toolsuite does support it, just wanted to ask whether it could be 
included as well in peptide-shaker.

> What version of the product are you using? On what operating system?
Peptide-shaker 0.17.1

> Please provide any additional information below.
Thilo just wanted to do some metaproteomics searches on his laptop and now he 
is bothering you guys. :-)

> If the reported issue resulted in the tool crashing, please
> also upload the file called PeptideShaker.log (found in the
> PeptideShaker-X.Y.Z\conf folder).

Original issue reported on code.google.com by Thilo.M...@gmx.de on 31 May 2012 at 11:24

GoogleCodeExporter commented 9 years ago 
Code has been updated. The amino acid 'J' will be supported in the next release.

Original comment by harald.b...@gmail.com on 1 Jun 2012 at 12:37