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Immortalin / peptide-shaker

Automatically exported from code.google.com/p/peptide-shaker
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Import cancelled #57

Closed GoogleCodeExporter closed 9 years ago

GoogleCodeExporter commented 9 years ago 
> What steps will reproduce the problem?

It seems to be when I have a large amount of data I am trying to combine. I've 
seen it with a number of different searches now.

> What is the expected output? What do you see instead?
I expect a fully loaded file, I get a cancelled import.

> What version of the product are you using? On what operating system?
0.35.6. Win7 64-bit, all updates, 64 GB RAM.

> Please provide any additional information below.
I am attempting to combine the results for numerous searches (different search 
algorithms) of multiple MS files (different samples). This takes days to 
process, so it's a tad annoying when it fails right near the end.

> If the reported issue resulted in the tool crashing, please
> also upload the file called PeptideShaker.log (found in the
> PeptideShaker-X.Y.Z\resources folder).

It won't let me attach files and when I paste the file, the resutl is too long, 
so I'll post this into the Google group.

Original issue reported on code.google.com by snoor...@gmail.com on 21 Dec 2014 at 8:44

GoogleCodeExporter commented 9 years ago 
This was fixed via the google group. Don't hesitate to contact us again if I am 
mistaking :)

Marc

Original comment by mvau...@gmail.com on 23 Jan 2015 at 2:55

GoogleCodeExporter commented 9 years ago 
I Marc,

it's still hanging on the DBY_100 results when I use PhosphoRS. I think I
passed along this dataset the second time around? If not, let me know and I
can provide it if you want to take a look.

If I use A-score it's all fine, a lot quicker too. For this data, it
doesn't matter if I haven't been consistent with the processing of
different files, so I've just used A-score. Thought I better let you know.

Peter

Original comment by snoor...@gmail.com on 27 Jan 2015 at 8:53

GoogleCodeExporter commented 9 years ago 
Hi again,

Thank you for notifying us on this! It is great if you can use the A-score for 
this data. I am working on improving our implementation of PhosphoRS so that it 
goes through your files as fast as with other mass specs :)

Best regards,

Marc

Original comment by mvau...@gmail.com on 29 Jan 2015 at 9:35