Export of the risk in the csv

[ANaaim]

Two elements in this PR :

• Export the risk in the csv
• Calculate the risk for the euler sequences.

---

This change is 

[ANaaim]

Probably some improvong to do on where are positioned the function.

I will continue with the export of the correct name of the degree of freedom

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 91.22807% with 5 lines in your changes are missing coverage. Please review.

:exclamation: No coverage uploaded for pull request base (main@74486ed). Click here to learn what that means.

Files	Patch %	Lines
spartacus/src/row_data.py	88.46%	3 Missing :warning:
spartacus/src/enums.py	66.66%	2 Missing :warning:

Additional details and impacted files

```diff @@ Coverage Diff @@ ## main #129 +/- ## ======================================= Coverage ? 66.94% ======================================= Files ? 19 Lines ? 1180 Branches ? 0 ======================================= Hits ? 790 Misses ? 390 Partials ? 0 ```

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.

[ANaaim]

DX pour la modif de code :

1. Label
2. Sense
3. Origin
4. Direction
5. Euler sequence
6. Translations CS
7. TH joint angle

[ANaaim]

spartacus/src/row_data.py line 724 at r1 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

Put this in a method `self.total_risk` ?

Would it be more coherent to put it in the deviation class ?

[ANaaim]

spartacus/src/row_data.py line 677 at r1 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

Put this Joint class

Is joint_euler_angle_ISB_with adaptation_from_segment seems more a method of a row_data ==> You need to know both the distal and proximal segment coordinate system and the associated euler sequences to be able to determine if the euler sequences is ISB.

For quantify_joint_risk it should be moved in deviation I supposed (which are method for row_data as I understand it but we want them to be more readable)

[ANaaim]

spartacus/src/row_data.py line 634 at r1 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

Use D notations D1, D2, D3, D4 ?

Everything in the Deviation class as suggested below

[ANaaim]

spartacus/src/row_data.py line 675 at r1 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

In file deviation.py ```python class Deviation @staticmethod def euler_sequence(...) -> float return @staticmethod def label(...) -> float return ```

deviation.py file added with all the current risk calculated

[ANaaim]

spartacus/src/enums.py line 303 at r2 (raw file):

def isb_legend_rotation(joint_type: JointType) -> (str, str, str):

Where this should be ?

[ANaaim]

spartacus/src/row_data.py line 657 at r1 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

extra documentation

Done

[ANaaim]

spartacus/src/row_data.py line 675 at r1 (raw file):

Previously, ANaaim (Alexandre Naaim) wrote…

deviation.py file added with all the current risk calculated

Risk was changed to confidence

[ANaaim]

spartacus/src/load.py line 145 at r2 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

define types of entry while creating the dataframe.

Done

[ANaaim]

spartacus/src/load.py line 140 at r2 (raw file):

Previously, Ipuch (Pierre Puchaud) wrote…

biomechanical_dof

Done

[ANaaim]

[ANaaim]

As the image above show ==> new name seems ok ==> should be merge