Closed marcodigennaro closed 1 month ago
Did you manage to find a solution to the "FileNotFoundError: [Errno 2] No such file or directory: 'plt.pdb" error?
no
Same error: "FileNotFoundError: [Errno 2] No such file or directory: 'plt.pdb".
because the stupid BOSS is compiled for linux using 32 bits libraries, but the system we used is based on 64 bits libraries.
I thought this may be the case, I've seen some workarounds for previous linux distributions that allow installation of packages that allow for compatibility but not sure if that exists for more recent versions (e.g. Ubuntu 22.04)... I tried using an older version of Ubuntu (19.xx) on a virtual box but ran into the same issues still
The issue would be solved by building the 32 bit libraries into you 64 bit Linux machine.
if you are a root account, just typing:
yum -y install glibc.i686
yum -y install libgcc*i686 libstdc++*i686 glibc*i686 libgfortran*i686
Hello, I tried to run ligpargen on the phenol file found in the exemple dir.
when using my file, generated from openbabel I get the error below:
The error is clear here:
Explicit valence for atom # 0 C, 5, is greater than permitted
, so I modified the input file, (C1-
andN2-
become respectivelyC
N
)but I get another error.Thank you for your support