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J35P312
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SVDB
structural variant database software
MIT License
38
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16
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Annotate missing values as -1
#71
fellen31
closed
2 weeks ago
8
Discrepancy between using --db and --sqdb built from the same VCF
#70
fellen31
opened
2 weeks ago
0
List index out of range
#69
gavinmonahan
opened
1 year ago
1
fixed typo
#68
bounlu
closed
1 year ago
0
Only keep one INFO field
#67
Akazhiel
opened
1 year ago
1
UnicodeDecodeError
#66
yangyxt
closed
1 year ago
3
Fix argument mismatch
#65
ramprasadn
closed
1 year ago
5
main() takes exactly 2 positional arguments (1 given)
#64
FriederikeHanssen
closed
1 year ago
1
Syntax error with singularity image
#63
yangyxt
closed
1 year ago
2
update tmp file names
#62
ramprasadn
closed
1 year ago
3
2.7.0
#61
J35P312
closed
1 year ago
0
How to combine delly,lumpy,manta and tiddit result?
#60
ld9866
closed
1 year ago
5
set=Intersection is not fully informative; add FOUND_IN tag?
#59
dnil
opened
1 year ago
2
Enhance the FORMAT column of merge subcommand.
#58
xiucz
opened
2 years ago
2
The install document should be updated.
#57
xiucz
closed
2 years ago
2
Using SVDB for merging VCF files of different samples?
#56
dr-ashu-geno
closed
2 years ago
1
Merging BNDs in different chromosomes
#55
fgvieira
closed
2 years ago
3
Parsing multiple filters
#54
jemten
closed
2 years ago
0
places svdb_origin tag under if statement
#53
jemten
closed
2 years ago
1
Find sv from seq
#52
J35P312
closed
2 years ago
1
Bug: missing headers
#51
fgvieira
opened
2 years ago
0
Feat/fix picarderror
#50
ramprasadn
closed
2 years ago
2
Fixed python import issue with python3
#49
insung3511
closed
2 years ago
6
Add information for all callers in INFO for overlapping events
#48
J35P312
closed
2 years ago
3
Add missing header infomation in svdb query output
#47
ramprasadn
closed
2 years ago
2
Add information for all callers in `INFO` for overlapping events
#46
khurrammaqbool
closed
2 years ago
1
Enable svdb query for multiple databases
#45
ramprasadn
closed
2 years ago
2
updating dockerfile
#44
jemten
closed
2 years ago
2
fix: BND position
#43
khurrammaqbool
closed
2 years ago
1
No_intra flag
#42
Akazhiel
closed
2 years ago
1
changed breakend reading
#41
kristinebilgrav
closed
3 years ago
1
Insertion distance
#40
J35P312
closed
3 years ago
1
Quickfixes to the export module
#39
J35P312
closed
3 years ago
1
Test DBSCAN and overlap modules
#38
J35P312
closed
3 years ago
1
Initial tests
#37
DanielAndreasen
closed
3 years ago
2
Cleanup
#36
DanielAndreasen
closed
3 years ago
6
Refactoring
#35
DanielAndreasen
opened
3 years ago
5
Add new variants to existing database
#34
DanielAndreasen
opened
3 years ago
1
What does the frequency mean?
#33
DanielAndreasen
closed
4 years ago
2
Query: Implement max_frq in order to avoid higher frequencies SVs
#32
DanielAndreasen
closed
4 years ago
1
Query: Only write variants with frequency lower than a given value
#31
DanielAndreasen
closed
4 years ago
1
More readable layout of README
#30
DanielAndreasen
closed
4 years ago
1
feat(docker): adds a dockerfile
#29
jemten
closed
4 years ago
1
Query is failing with UnicodeDecodeError
#28
hassanfa
closed
4 years ago
1
Option to disable "Intersection" in set field
#27
bjhall
closed
4 years ago
5
What do "filterIn" "FilteredInAll" and "Intersection" mean in set flag?
#26
YiweiNiu
closed
4 years ago
2
Update LICENSE
#25
dnil
closed
4 years ago
1
Add option to only include PASS SVs when building DB
#24
fgvieira
closed
5 years ago
1
Error when exporting database
#23
fgvieira
closed
5 years ago
2
User defined VCF header
#22
fgvieira
opened
5 years ago
0
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