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JasperBoom
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caltha
A python package to process UMI tagged mixed amplicon metabarcoding data.
GNU Affero General Public License v3.0
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Check local storage.
#16
JasperBoom
closed
3 years ago
0
Add more test files.
#15
JasperBoom
closed
4 years ago
0
Restart setup testing and address issues.
#14
JasperBoom
closed
4 years ago
0
Fix bug where umi count would be reset to 1 for every read.
#13
JasperBoom
closed
4 years ago
0
Add pyfastx functionality.
#12
JasperBoom
closed
4 years ago
1
Update master to match develop.
#11
JasperBoom
closed
4 years ago
0
Setup pre-commit with Black and Flake8.
#10
JasperBoom
closed
4 years ago
0
Add a UMI block count analysis.
#9
JasperBoom
opened
4 years ago
1
Trim primers/UMI from BLAST file reads.
#8
JasperBoom
opened
4 years ago
0
Remove UMI SEQ and Centroid Read from tabular output.
#7
JasperBoom
closed
4 years ago
1
Check errors occuring when input is in fastq format.
#6
JasperBoom
closed
4 years ago
1
Add parallel processing to Caltha.
#5
JasperBoom
closed
4 years ago
0
Remove -f/-format argument from Caltha.
#4
JasperBoom
closed
4 years ago
1
Produce zip file of VSEARCH clustering output.
#3
JasperBoom
closed
4 years ago
1
Add parallel processing to Caltha.
#2
JasperBoom
closed
4 years ago
1
Allow one mismatch in primer/adapter search.
#1
JasperBoom
opened
4 years ago
2