KHP-Informatics ngseasy issues

KHP-Informatics / ngseasy

Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)

GNU General Public License v2.0

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issues

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Installation error 8

#31 rvrane opened 4 years ago
0
Installing libX11-dev libXpm-dev libXft-dev libXext-dev Dependencies

#30 LindoNkambule opened 6 years ago
0
What is password for root user on ngseasy docker image?

#29 david-wb closed 6 years ago
1
Still developing and using this?

#28 biocyberman opened 8 years ago
2
Fix issue #24 on upstream, wget now ignores existing files

#27 biocyberman closed 8 years ago
1
Cleanup RUNs don't reduce image size

#26 SeijiSuenaga opened 8 years ago
1
NGSeasy Calling issue

#25 belhocine13 opened 8 years ago
1
test if dataset exists locally before downloaded

#24 afolarin closed 8 years ago
0
Defaults to placing log and tmp dirs in home dir

#23 afolarin opened 8 years ago
1
Fail if Installdir unset

#22 afolarin opened 8 years ago
1
GeL Env Pipeline Test

#21 afolarin closed 8 years ago
1
Re Dev : To Do

#20 snewhouse opened 8 years ago
13
Update Dockerfile

#19 fjrmoreews closed 8 years ago
0
Update Dockerfile

#18 fjrmoreews closed 8 years ago
0
INSTALLDIR

#17 bwkchee closed 8 years ago
1
permission denied in fastqc container

#16 olgamelnichuk closed 8 years ago
2
ngseasy logs an error when there is no ~/ngseasy_tmp directory

#15 olgamelnichuk closed 8 years ago
1
ngseasy requires user to create an empty run_logs folder in the ngs_projects

#14 olgamelnichuk closed 8 years ago
1
Add a Gitter chat badge to README.md

#13 gitter-badger closed 9 years ago
0
varcaller:ensemble:HaplotypeCaller a typo

#12 olgamelnichuk closed 9 years ago
3
Wrong path to ngseasy_resources in ngseasy_trimmomatic script...

#11 olgamelnichuk closed 9 years ago
3
ngseasy_initiate_project creates 'recursive' directories

#10 olgamelnichuk closed 9 years ago
15
Testing Network Speed : speedtest-cli

#9 snewhouse opened 9 years ago
1
About downloading time and running errors

#8 StudySomeCode closed 9 years ago
3
Where to download the foo_1.fq.gz and foo_2.fq.gz file?

#7 zhaozhang closed 9 years ago
2
Bash script errors

#6 natacourby closed 9 years ago
7
to doz

#5 snewhouse opened 9 years ago
24
ngseasy stopping in ngseasy_variant_calling step

#4 dalloliogm closed 9 years ago
6
silly mkdir -p fix

#3 dalloliogm closed 9 years ago
1
ERROR 403 when downloading hg19 file

#2 dalloliogm closed 9 years ago
17
minor fixes

#1 dalloliogm closed 9 years ago
3