sceptre
sceptre
is an R package for single-cell CRISPR screen data analysis,
emphasizing statistical rigor, massive scalability, and ease of use.
sceptre
at massive scalesceptre
v0.10.0 represents another a major upgrade to the sceptre
software. We have integrated sceptre
with
ondisc
, a companion R
package that facilitates large-scale computing on single-cell data.
sceptre
now supports the analysis of single-cell CRISPR screen data
out-of-core on a laptop or distributed across hundreds of processors on
a computing cluster or cloud.
sceptre
v0.10.0 includes the following updates:
sceptre
objects, enabling the analysis of
data too large to fit in memorysceptre
Nextflow
pipeline, enabling
the deployment of sceptre
across hundreds of processors on a cluster
or cloudsceptre
and the statistical
methodology underlying sceptre
You can see our RECOMB poster for more information about this update.
sceptre
also recently was featured in a 10x Genomics analysis
guide.
For bug reports, please open a GitHub
issue. For questions
about sceptre
functionality, documentation, or how to apply it to your
data, please start a discussion under
Q&A.