search

KechrisLab / multiMiR

Development repository for the multiMiR database's R API
Other
20 stars 3 forks source link

Gateway timeout #50

Closed jeremydavisturak closed 2 months ago

jeremydavisturak commented 1 year ago

Hello,

I am consistently getting this error:

get_multimir(mirna=miRNAs$Symbol,table='predicted', org='human')
Searching diana_microt ...
Error: Gateway Timeout

sessionInfo() R version 4.0.3 (2020-10-10) Platform: x86_64-conda-linux-gnu (64-bit) Running under: Ubuntu 14.04.5 LTS

Matrix products: default BLAS/LAPACK: /opt/miniconda3/envs/R4.0/lib/libopenblasp-r0.3.10.so

locale: [1] C

attached base packages: [1] stats graphics grDevices utils datasets methods base

other attached packages: [1] multiMiR_1.12.0

smahaffey commented 1 year ago

@jeremydavisturak I'm sorry some how I didn't see your issue.

My guess is that too many miRNAs are being searched and its exceeding the maximum time it will wait for a query to return results. The best option for now is to break down that list of miRNAs. If not can you provide an example of a miRNA to test.