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KitwareMedical / Deprecated-VesselView

VesselView is a demonstration application from Kitware Inc for the segmentation, registration and analysis of tubes( e.g, blood vessels) in 3D images (e.g, MRI, CT and Ultrasound).
http://public.kitware.com/Wiki/TubeTK/About
Apache License 2.0
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Perfomance tests with the minimum amount of modules #34

Open vovythevov opened 9 years ago

vovythevov commented 9 years ago

First, make a list of modules to remove. Once all the modules are removed, make some performance tests on opening.

vovythevov commented 9 years ago

List of modules loaded in VesselView as of now:

compareVolumesInstance = <CompareVolumes.CompareVolumes instance>
DICOMInstance = <DICOM.DICOM instance>
DICOMScalarVolumePluginInstance = <DICOMScalarVolumePlugin.DICOMScalar...
DICOMSlicerDataBundlePluginInstance = <DICOMSlicerDataBundlePlugin.DIC...
DataProbeInstance = <DataProbe.DataProbe instance>
EditorInstance = <Editor.Editor instance>
InteractiveConnectedComponentsUsingParzenPDFsInstance = <InteractiveCo...
InteractiveSegmentTubesInstance = <InteractiveSegmentTubes.Interactive...
LabelStatisticsInstance = <LabelStatistics.LabelStatistics instance>
PerformanceTestsInstance = <PerformanceTests.PerformanceTests instance...
SampleDataInstance = <SampleData.SampleData instance>
SelfTestsInstance = <SelfTests.SelfTests instance>
SurfaceToolboxInstance = <SurfaceToolbox.SurfaceToolbox instance>
VectorToScalarVolumeInstance = <VectorToScalarVolume.VectorToScalarVol...
WelcomeInstance = <Welcome.Welcome instance>
WelcomeWidget = <Welcome.WelcomeWidget instance>
WorkflowInstance = <Workflow.Workflow instance>
acpctransform = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000056D9...
addscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A...
annotations = qSlicerAnnotationsModule (qSlicerAnnotationsModule at: 0...
atlasbuilderusingintensity = qSlicerCLIModule (qSlicerCLIModule at: 0x...
bsplinetodeformationfield = qSlicerCLIModule (qSlicerCLIModule at: 0x0...
cameras = qSlicerCamerasModule (qSlicerCamerasModule at: 0x00000000376...
castscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A...
checkerboardfilter = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000...
colors = qSlicerColorsModule (qSlicerColorsModule at: 0x00000000376CAE...
comparevolumes = qSlicerScriptedLoadableModule (qSlicerScriptedLoadabl...
computebinaryimagesimilaritymetrics = qSlicerCLIModule (qSlicerCLIModu...
computeimagesimilaritymetrics = qSlicerCLIModule (qSlicerCLIModule at:...
computeimagestatisticsusingmask = qSlicerCLIModule (qSlicerCLIModule a...
computeimagetotuberigidmetricimage = qSlicerCLIModule (qSlicerCLIModul...
computesegmenttubesparameters = qSlicerCLIModule (qSlicerCLIModule at:...
computetubegraphprobability = qSlicerCLIModule (qSlicerCLIModule at: 0...
computetubemeasures = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000...
computetubeprobability = qSlicerCLIModule (qSlicerCLIModule at: 0x0000...
convertinneroptictoplus = qSlicerCLIModule (qSlicerCLIModule at: 0x000...
convertshrunkenseedimagetolist = qSlicerCLIModule (qSlicerCLIModule at...
converttre = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A1B1960...
converttubegraphtoimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000...
converttubestodensityimage = qSlicerCLIModule (qSlicerCLIModule at: 0x...
converttubestoimage = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000...
converttubetotubegraph = qSlicerCLIModule (qSlicerCLIModule at: 0x0000...
createdicomseries = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003...
cropimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A1B4BB0)
cropvolume = qSlicerCropVolumeModule (qSlicerCropVolumeModule at: 0x00...
curvatureanisotropicdiffusion = qSlicerCLIModule (qSlicerCLIModule at:...
data = qSlicerDataModule (qSlicerDataModule at: 0x00000000376DC2B0)
dataprobe = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModu...
deblendtomosynthesisslicesusingprior = qSlicerCLIModule (qSlicerCLIMod...
dicom = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule a...
dicomPlugins = {'DICOMScalarVolumePlugin': <class 'DICOMScalarVolumePl...
dicomscalarvolumeplugin = qSlicerScriptedLoadableModule (qSlicerScript...
dicomslicerdatabundleplugin = qSlicerScriptedLoadableModule (qSlicerSc...
doublearrays = qSlicerDoubleArraysModule (qSlicerDoubleArraysModule at...
editor = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule ...
editorExtensions = {'InteractiveConnectedComponentsUsingParzenPDFs': <...
enhancecoherenceandedgesusingdiffusion = qSlicerCLIModule (qSlicerCLIM...
enhancecoherenceusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at...
enhancecontrastusingprior = qSlicerCLIModule (qSlicerCLIModule at: 0x0...
enhanceedgesusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at: 0x...
enhancetubesusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at: 0x...
enhancetubesusingdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIMo...
enhanceusingdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIModule ...
enhanceusingnjetdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIMod...
eventbroker = qSlicerEventBrokerModule (qSlicerEventBrokerModule at: 0...
expertautomatedregistration = qSlicerCLIModule (qSlicerCLIModule at: 0...
extractmetricimageslice = qSlicerCLIModule (qSlicerCLIModule at: 0x000...
extractskeleton = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD...
fiducialregistration = qSlicerCLIModule (qSlicerCLIModule at: 0x000000...
gaussianblurimagefilter = qSlicerCLIModule (qSlicerCLIModule at: 0x000...
gradientanisotropicdiffusion = qSlicerCLIModule (qSlicerCLIModule at: ...
grayscalefillholeimagefilter = qSlicerCLIModule (qSlicerCLIModule at: ...
grayscalegrindpeakimagefilter = qSlicerCLIModule (qSlicerCLIModule at:...
grayscalemodelmaker = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000...
histogrammatching = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003...
imagelabelcombine = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003...
imagemath = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD95A30)
interactiveconnectedcomponentsusingparzenpdfs = qSlicerScriptedLoadabl...
interactivesegmenttubes = qSlicerScriptedLoadableModule (qSlicerScript...
labelmapsmoothing = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003...
labelstatistics = qSlicerScriptedLoadableModule (qSlicerScriptedLoadab...
markups = qSlicerMarkupsModule (qSlicerMarkupsModule at: 0x00000000376...
maskscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A...
medianimagefilter = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003...
mergeadjacentimages = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000...
mergemodels = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9866...
mergetubegraphs = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD...
modelmaker = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD97470...
models = qSlicerModelsModule (qSlicerModelsModule at: 0x00000000376EBF...
modeltolabelmap = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD...
multiplyscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000...
n4itkbiasfieldcorrection = qSlicerCLIModule (qSlicerCLIModule at: 0x00...
orientscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000...
performancetests = qSlicerScriptedLoadableModule (qSlicerScriptedLoada...
petstandarduptakevaluecomputation = qSlicerCLIModule (qSlicerCLIModule...
probevolumewithmodel = qSlicerCLIModule (qSlicerCLIModule at: 0x000000...
reformat = qSlicerReformatModule (qSlicerReformatModule at: 0x00000000...
registerimages = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9...
registerimagetotubesusingrigidtransform = qSlicerCLIModule (qSlicerCLI...
registerusingimagecenters = qSlicerCLIModule (qSlicerCLIModule at: 0x0...
resampledtivolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003...
resampleimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9C...
resamplescalarvectordwivolume = qSlicerCLIModule (qSlicerCLIModule at:...
resamplescalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000...
robuststatisticssegmenter = qSlicerCLIModule (qSlicerCLIModule at: 0x0...
sampleDataSources = {}
samplecliapplication = qSlicerCLIModule (qSlicerCLIModule at: 0x000000...
sampledata = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableMod...
sceneviews = qSlicerSceneViewsModule (qSlicerSceneViewsModule at: 0x00...
segmentbinaryimageskeleton = qSlicerCLIModule (qSlicerCLIModule at: 0x...
segmentconnectedcomponents = qSlicerCLIModule (qSlicerCLIModule at: 0x...
segmentconnectedcomponentsusingparzenpdfs = qSlicerCLIModule (qSlicerC...
segmenttubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003ADA03...
segmentusingotsuthreshold = qSlicerCLIModule (qSlicerCLIModule at: 0x0...
selftests = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModu...
shrinkimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F62B...
simpleregiongrowingsegmentation = qSlicerCLIModule (qSlicerCLIModule a...
simulateacquisitionartifactsusingprior = qSlicerCLIModule (qSlicerCLIM...
spatialobjects = qSlicerSpatialObjectsModule (qSlicerSpatialObjectsMod...
subjecthierarchy = qSlicerSubjectHierarchyModule (qSlicerSubjectHierar...
subsampletubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F...
subtractscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000...
surfacetoolbox = qSlicerScriptedLoadableModule (qSlicerScriptedLoadabl...
thresholdscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000...
tortuosity = qSlicerTortuosityModule (qSlicerTortuosityModule at: 0x00...
transforms = qSlicerTransformsModule (qSlicerTransformsModule at: 0x00...
transformtubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F...
units = qSlicerUnitsModule (qSlicerUnitsModule at: 0x000000003C77A830)
vectortoscalarvolume = qSlicerScriptedLoadableModule (qSlicerScriptedL...
viewcontrollers = qSlicerViewControllersModule (qSlicerViewControllers...
volumerendering = qSlicerVolumeRenderingModule (qSlicerVolumeRendering...
volumes = qSlicerVolumesModule (qSlicerVolumesModule at: 0x000000003C7...
votingbinaryholefillingimagefilter = qSlicerCLIModule (qSlicerCLIModul...
welcome = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule...
workflow = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModul...
finetjul commented 9 years ago

Correction: Specify what module you want to build. On Sep 29, 2014 8:07 PM, julien.finet@kitware.com wrote:

With the last SPT, you can easily specify you want to build. J. On Sep 29, 2014 4:17 PM, "Johan Andruejol" notifications@github.com wrote:

List of modules loaded in VesselView as of now:

compareVolumesInstance = DICOMInstance = DICOMScalarVolumePluginInstance = <DICOMScalarVolumePlugin.DICOMScalar... DICOMSlicerDataBundlePluginInstance = <DICOMSlicerDataBundlePlugin.DIC... DataProbeInstance = EditorInstance = InteractiveConnectedComponentsUsingParzenPDFsInstance = <InteractiveCo... InteractiveSegmentTubesInstance = <InteractiveSegmentTubes.Interactive... LabelStatisticsInstance = PerformanceTestsInstance = <PerformanceTests.PerformanceTests instance... SampleDataInstance = SelfTestsInstance = SurfaceToolboxInstance = VectorToScalarVolumeInstance = <VectorToScalarVolume.VectorToScalarVol... WelcomeInstance = WelcomeWidget = WorkflowInstance = acpctransform = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000056D9... addscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... annotations = qSlicerAnnotationsModule (qSlicerAnnotationsModule at: 0... atlasbuilderusingintensity = qSlicerCLIModule (qSlicerCLIModule at: 0x... bsplinetodeformationfield = qSlicerCLIModule (qSlicerCLIModule at: 0x0... cameras = qSlicerCamerasModule (qSlicerCamerasModule at: 0x00000000376... castscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... checkerboardfilter = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000... colors = qSlicerColorsModule (qSlicerColorsModule at: 0x00000000376CAE... comparevolumes = qSlicerScriptedLoadableModule (qSlicerScriptedLoadabl... computebinaryimagesimilaritymetrics = qSlicerCLIModule (qSlicerCLIModu... computeimagesimilaritymetrics = qSlicerCLIModule (qSlicerCLIModule at:... computeimagestatisticsusingmask = qSlicerCLIModule (qSlicerCLIModule a... computeimagetotuberigidmetricimage = qSlicerCLIModule (qSlicerCLIModul... computesegmenttubesparameters = qSlicerCLIModule (qSlicerCLIModule at:... computetubegraphprobability = qSlicerCLIModule (qSlicerCLIModule at: 0... computetubemeasures = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... computetubeprobability = qSlicerCLIModule (qSlicerCLIModule at: 0x0000... convertinneroptictoplus = qSlicerCLIModule (qSlicerCLIModule at: 0x000... convertshrunkenseedimagetolist = qSlicerCLIModule (qSlicerCLIModule at... converttre = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A1B1960... converttubegraphtoimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000... converttubestodensityimage = qSlicerCLIModule (qSlicerCLIModule at: 0x... converttubestoimage = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... converttubetotubegraph = qSlicerCLIModule (qSlicerCLIModule at: 0x0000... createdicomseries = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... cropimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A1B4BB0) cropvolume = qSlicerCropVolumeModule (qSlicerCropVolumeModule at: 0x00... curvatureanisotropicdiffusion = qSlicerCLIModule (qSlicerCLIModule at:... data = qSlicerDataModule (qSlicerDataModule at: 0x00000000376DC2B0) dataprobe = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModu... deblendtomosynthesisslicesusingprior = qSlicerCLIModule (qSlicerCLIMod... dicom = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule a... dicomPlugins = {'DICOMScalarVolumePlugin': <class 'DICOMScalarVolumePl... dicomscalarvolumeplugin = qSlicerScriptedLoadableModule (qSlicerScript... dicomslicerdatabundleplugin = qSlicerScriptedLoadableModule (qSlicerSc... doublearrays = qSlicerDoubleArraysModule (qSlicerDoubleArraysModule at... editor = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule ... editorExtensions = {'InteractiveConnectedComponentsUsingParzenPDFs': <... enhancecoherenceandedgesusingdiffusion = qSlicerCLIModule (qSlicerCLIM... enhancecoherenceusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at... enhancecontrastusingprior = qSlicerCLIModule (qSlicerCLIModule at: 0x0... enhanceedgesusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at: 0x... enhancetubesusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at: 0x... enhancetubesusingdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIMo... enhanceusingdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIModule ... enhanceusingnjetdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIMod... eventbroker = qSlicerEventBrokerModule (qSlicerEventBrokerModule at: 0... expertautomatedregistration = qSlicerCLIModule (qSlicerCLIModule at: 0... extractmetricimageslice = qSlicerCLIModule (qSlicerCLIModule at: 0x000... extractskeleton = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD... fiducialregistration = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... gaussianblurimagefilter = qSlicerCLIModule (qSlicerCLIModule at: 0x000... gradientanisotropicdiffusion = qSlicerCLIModule (qSlicerCLIModule at: ... grayscalefillholeimagefilter = qSlicerCLIModule (qSlicerCLIModule at: ... grayscalegrindpeakimagefilter = qSlicerCLIModule (qSlicerCLIModule at:... grayscalemodelmaker = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... histogrammatching = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... imagelabelcombine = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... imagemath = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD95A30) interactiveconnectedcomponentsusingparzenpdfs = qSlicerScriptedLoadabl... interactivesegmenttubes = qSlicerScriptedLoadableModule (qSlicerScript... labelmapsmoothing = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... labelstatistics = qSlicerScriptedLoadableModule (qSlicerScriptedLoadab... markups = qSlicerMarkupsModule (qSlicerMarkupsModule at: 0x00000000376... maskscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... medianimagefilter = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... mergeadjacentimages = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... mergemodels = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9866... mergetubegraphs = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD... modelmaker = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD97470... models = qSlicerModelsModule (qSlicerModelsModule at: 0x00000000376EBF... modeltolabelmap = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD... multiplyscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... n4itkbiasfieldcorrection = qSlicerCLIModule (qSlicerCLIModule at: 0x00... orientscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000... performancetests = qSlicerScriptedLoadableModule (qSlicerScriptedLoada... petstandarduptakevaluecomputation = qSlicerCLIModule (qSlicerCLIModule... probevolumewithmodel = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... reformat = qSlicerReformatModule (qSlicerReformatModule at: 0x00000000... registerimages = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9... registerimagetotubesusingrigidtransform = qSlicerCLIModule (qSlicerCLI... registerusingimagecenters = qSlicerCLIModule (qSlicerCLIModule at: 0x0... resampledtivolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... resampleimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9C... resamplescalarvectordwivolume = qSlicerCLIModule (qSlicerCLIModule at:... resamplescalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... robuststatisticssegmenter = qSlicerCLIModule (qSlicerCLIModule at: 0x0... sampleDataSources = {} samplecliapplication = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... sampledata = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableMod... sceneviews = qSlicerSceneViewsModule (qSlicerSceneViewsModule at: 0x00... segmentbinaryimageskeleton = qSlicerCLIModule (qSlicerCLIModule at: 0x... segmentconnectedcomponents = qSlicerCLIModule (qSlicerCLIModule at: 0x... segmentconnectedcomponentsusingparzenpdfs = qSlicerCLIModule (qSlicerC... segmenttubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003ADA03... segmentusingotsuthreshold = qSlicerCLIModule (qSlicerCLIModule at: 0x0... selftests = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModu... shrinkimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F62B... simpleregiongrowingsegmentation = qSlicerCLIModule (qSlicerCLIModule a... simulateacquisitionartifactsusingprior = qSlicerCLIModule (qSlicerCLIM... spatialobjects = qSlicerSpatialObjectsModule (qSlicerSpatialObjectsMod... subjecthierarchy = qSlicerSubjectHierarchyModule (qSlicerSubjectHierar... subsampletubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F... subtractscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... surfacetoolbox = qSlicerScriptedLoadableModule (qSlicerScriptedLoadabl... thresholdscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... tortuosity = qSlicerTortuosityModule (qSlicerTortuosityModule at: 0x00... transforms = qSlicerTransformsModule (qSlicerTransformsModule at: 0x00... transformtubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F... units = qSlicerUnitsModule (qSlicerUnitsModule at: 0x000000003C77A830) vectortoscalarvolume = qSlicerScriptedLoadableModule (qSlicerScriptedL... viewcontrollers = qSlicerViewControllersModule (qSlicerViewControllers... volumerendering = qSlicerVolumeRenderingModule (qSlicerVolumeRendering... volumes = qSlicerVolumesModule (qSlicerVolumesModule at: 0x000000003C7... votingbinaryholefillingimagefilter = qSlicerCLIModule (qSlicerCLIModul... welcome = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule... workflow = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModul...

— Reply to this email directly or view it on GitHub https://github.com/KitwareMedical/VesselView/issues/34#issuecomment-57222303 .

finetjul commented 9 years ago

With the last SPT, you can easily specify you want to build. J. On Sep 29, 2014 4:17 PM, "Johan Andruejol" notifications@github.com wrote:

List of modules loaded in VesselView as of now:

compareVolumesInstance = DICOMInstance = DICOMScalarVolumePluginInstance = <DICOMScalarVolumePlugin.DICOMScalar... DICOMSlicerDataBundlePluginInstance = <DICOMSlicerDataBundlePlugin.DIC... DataProbeInstance = EditorInstance = InteractiveConnectedComponentsUsingParzenPDFsInstance = <InteractiveCo... InteractiveSegmentTubesInstance = <InteractiveSegmentTubes.Interactive... LabelStatisticsInstance = PerformanceTestsInstance = <PerformanceTests.PerformanceTests instance... SampleDataInstance = SelfTestsInstance = SurfaceToolboxInstance = VectorToScalarVolumeInstance = <VectorToScalarVolume.VectorToScalarVol... WelcomeInstance = WelcomeWidget = WorkflowInstance = acpctransform = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000056D9... addscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... annotations = qSlicerAnnotationsModule (qSlicerAnnotationsModule at: 0... atlasbuilderusingintensity = qSlicerCLIModule (qSlicerCLIModule at: 0x... bsplinetodeformationfield = qSlicerCLIModule (qSlicerCLIModule at: 0x0... cameras = qSlicerCamerasModule (qSlicerCamerasModule at: 0x00000000376... castscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... checkerboardfilter = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000... colors = qSlicerColorsModule (qSlicerColorsModule at: 0x00000000376CAE... comparevolumes = qSlicerScriptedLoadableModule (qSlicerScriptedLoadabl... computebinaryimagesimilaritymetrics = qSlicerCLIModule (qSlicerCLIModu... computeimagesimilaritymetrics = qSlicerCLIModule (qSlicerCLIModule at:... computeimagestatisticsusingmask = qSlicerCLIModule (qSlicerCLIModule a... computeimagetotuberigidmetricimage = qSlicerCLIModule (qSlicerCLIModul... computesegmenttubesparameters = qSlicerCLIModule (qSlicerCLIModule at:... computetubegraphprobability = qSlicerCLIModule (qSlicerCLIModule at: 0... computetubemeasures = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... computetubeprobability = qSlicerCLIModule (qSlicerCLIModule at: 0x0000... convertinneroptictoplus = qSlicerCLIModule (qSlicerCLIModule at: 0x000... convertshrunkenseedimagetolist = qSlicerCLIModule (qSlicerCLIModule at... converttre = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A1B1960... converttubegraphtoimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000... converttubestodensityimage = qSlicerCLIModule (qSlicerCLIModule at: 0x... converttubestoimage = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... converttubetotubegraph = qSlicerCLIModule (qSlicerCLIModule at: 0x0000... createdicomseries = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... cropimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A1B4BB0) cropvolume = qSlicerCropVolumeModule (qSlicerCropVolumeModule at: 0x00... curvatureanisotropicdiffusion = qSlicerCLIModule (qSlicerCLIModule at:... data = qSlicerDataModule (qSlicerDataModule at: 0x00000000376DC2B0) dataprobe = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModu... deblendtomosynthesisslicesusingprior = qSlicerCLIModule (qSlicerCLIMod... dicom = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule a... dicomPlugins = {'DICOMScalarVolumePlugin': <class 'DICOMScalarVolumePl... dicomscalarvolumeplugin = qSlicerScriptedLoadableModule (qSlicerScript... dicomslicerdatabundleplugin = qSlicerScriptedLoadableModule (qSlicerSc... doublearrays = qSlicerDoubleArraysModule (qSlicerDoubleArraysModule at... editor = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule ... editorExtensions = {'InteractiveConnectedComponentsUsingParzenPDFs': <... enhancecoherenceandedgesusingdiffusion = qSlicerCLIModule (qSlicerCLIM... enhancecoherenceusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at... enhancecontrastusingprior = qSlicerCLIModule (qSlicerCLIModule at: 0x0... enhanceedgesusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at: 0x... enhancetubesusingdiffusion = qSlicerCLIModule (qSlicerCLIModule at: 0x... enhancetubesusingdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIMo... enhanceusingdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIModule ... enhanceusingnjetdiscriminantanalysis = qSlicerCLIModule (qSlicerCLIMod... eventbroker = qSlicerEventBrokerModule (qSlicerEventBrokerModule at: 0... expertautomatedregistration = qSlicerCLIModule (qSlicerCLIModule at: 0... extractmetricimageslice = qSlicerCLIModule (qSlicerCLIModule at: 0x000... extractskeleton = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD... fiducialregistration = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... gaussianblurimagefilter = qSlicerCLIModule (qSlicerCLIModule at: 0x000... gradientanisotropicdiffusion = qSlicerCLIModule (qSlicerCLIModule at: ... grayscalefillholeimagefilter = qSlicerCLIModule (qSlicerCLIModule at: ... grayscalegrindpeakimagefilter = qSlicerCLIModule (qSlicerCLIModule at:... grayscalemodelmaker = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... histogrammatching = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... imagelabelcombine = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... imagemath = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD95A30) interactiveconnectedcomponentsusingparzenpdfs = qSlicerScriptedLoadabl... interactivesegmenttubes = qSlicerScriptedLoadableModule (qSlicerScript... labelmapsmoothing = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... labelstatistics = qSlicerScriptedLoadableModule (qSlicerScriptedLoadab... markups = qSlicerMarkupsModule (qSlicerMarkupsModule at: 0x00000000376... maskscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... medianimagefilter = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... mergeadjacentimages = qSlicerCLIModule (qSlicerCLIModule at: 0x0000000... mergemodels = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9866... mergetubegraphs = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD... modelmaker = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD97470... models = qSlicerModelsModule (qSlicerModelsModule at: 0x00000000376EBF... modeltolabelmap = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD... multiplyscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... n4itkbiasfieldcorrection = qSlicerCLIModule (qSlicerCLIModule at: 0x00... orientscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000... performancetests = qSlicerScriptedLoadableModule (qSlicerScriptedLoada... petstandarduptakevaluecomputation = qSlicerCLIModule (qSlicerCLIModule... probevolumewithmodel = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... reformat = qSlicerReformatModule (qSlicerReformatModule at: 0x00000000... registerimages = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9... registerimagetotubesusingrigidtransform = qSlicerCLIModule (qSlicerCLI... registerusingimagecenters = qSlicerCLIModule (qSlicerCLIModule at: 0x0... resampledtivolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... resampleimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003AD9C... resamplescalarvectordwivolume = qSlicerCLIModule (qSlicerCLIModule at:... resamplescalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... robuststatisticssegmenter = qSlicerCLIModule (qSlicerCLIModule at: 0x0... sampleDataSources = {} samplecliapplication = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... sampledata = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableMod... sceneviews = qSlicerSceneViewsModule (qSlicerSceneViewsModule at: 0x00... segmentbinaryimageskeleton = qSlicerCLIModule (qSlicerCLIModule at: 0x... segmentconnectedcomponents = qSlicerCLIModule (qSlicerCLIModule at: 0x... segmentconnectedcomponentsusingparzenpdfs = qSlicerCLIModule (qSlicerC... segmenttubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003ADA03... segmentusingotsuthreshold = qSlicerCLIModule (qSlicerCLIModule at: 0x0... selftests = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModu... shrinkimage = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F62B... simpleregiongrowingsegmentation = qSlicerCLIModule (qSlicerCLIModule a... simulateacquisitionartifactsusingprior = qSlicerCLIModule (qSlicerCLIM... spatialobjects = qSlicerSpatialObjectsModule (qSlicerSpatialObjectsMod... subjecthierarchy = qSlicerSubjectHierarchyModule (qSlicerSubjectHierar... subsampletubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F... subtractscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... surfacetoolbox = qSlicerScriptedLoadableModule (qSlicerScriptedLoadabl... thresholdscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... tortuosity = qSlicerTortuosityModule (qSlicerTortuosityModule at: 0x00... transforms = qSlicerTransformsModule (qSlicerTransformsModule at: 0x00... transformtubes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003C7F... units = qSlicerUnitsModule (qSlicerUnitsModule at: 0x000000003C77A830) vectortoscalarvolume = qSlicerScriptedLoadableModule (qSlicerScriptedL... viewcontrollers = qSlicerViewControllersModule (qSlicerViewControllers... volumerendering = qSlicerVolumeRenderingModule (qSlicerVolumeRendering... volumes = qSlicerVolumesModule (qSlicerVolumesModule at: 0x000000003C7... votingbinaryholefillingimagefilter = qSlicerCLIModule (qSlicerCLIModul... welcome = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModule... workflow = qSlicerScriptedLoadableModule (qSlicerScriptedLoadableModul...

— Reply to this email directly or view it on GitHub https://github.com/KitwareMedical/VesselView/issues/34#issuecomment-57222303 .

aylward commented 9 years ago

Let's eliminate the following and see what happens :)

DICOMSlicerDataBundlePluginInstance = <DICOMSlicerDataBundlePlugin.DIC... PerformanceTestsInstance = <PerformanceTests.PerformanceTests instance... VectorToScalarVolumeInstance = <VectorToScalarVolume.VectorToScalarVol... acpctransform = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000056D9... addscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003A... dicomslicerdatabundleplugin = qSlicerScriptedLoadableModule (qSlicerSc... markups = qSlicerMarkupsModule (qSlicerMarkupsModule at: 0x00000000376... -- Not certain what markups does. multiplyscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... orientscalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x00000000... petstandarduptakevaluecomputation = qSlicerCLIModule (qSlicerCLIModule... registerusingimagecenters = qSlicerCLIModule (qSlicerCLIModule at: 0x0... resampledtivolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000003... resamplescalarvectordwivolume = qSlicerCLIModule (qSlicerCLIModule at:... resamplescalarvolume = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... samplecliapplication = qSlicerCLIModule (qSlicerCLIModule at: 0x000000... simpleregiongrowingsegmentation = qSlicerCLIModule (qSlicerCLIModule a... subtractscalarvolumes = qSlicerCLIModule (qSlicerCLIModule at: 0x00000... vectortoscalarvolume = qSlicerScriptedLoadableModule (qSlicerScriptedL...

SampleDataInstance = -- Can we have it load VesselView specific sample data, or would that be a new module?

doublearrays = qSlicerDoubleArraysModule (qSlicerDoubleArraysModule at... -- Not certain

vovythevov commented 9 years ago

For Sample Data, we would need to have a new module.

vovythevov commented 9 years ago

Summary: