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KitwareMedical / tensorboard-plugin-3d

https://tensorboardplugin3d.readthedocs.io/en/latest/
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tensorboard tensorboard-visualization

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TensorBoardPlugin3D - 3D Tensor Visualization

PyPI Build and Test DOI Open in Colab

Introduction

TensorBoardPlugin3D is an open-source TensorBoard plugin that supports visualizing 3D output within the TensorBoard application, JupyterLab, Google Colab, and SageMaker.

Installation

Install the PyPI package:

pip install tensorboard-plugin-3d

MONAI Notebook Examples

The Spleen Segmentation 3D tutorial shows how to integrate MONAI into an existing PyTorch medical DL program and demonstrates using TensorBoardPlugin3D to view an image with a label to show the input data (shown in the first image) or to compare the model output with the input. Open in Colab

Get started with a quick view of the output data with the cached notebook. Open in Colab Spleen Image with Label Spleen Output

The UNet Segmentation 3D Ignite notebook provides a simple, fast-running notebook with demo data. If you're looking for a quick way to get started and see the plugin in action this is a great place to start. Open in Colab UNet Output

The BRATS Segmentation 3D notebook demonstrates brain tumor 3D segmentation with MONAI. The tutorial shows how to construct a training workflow of multi-labels segmentation task. Open in Colab

Get started with a quick view of the output data with the cached notebook. Open in Colab

Documentation

See the documentation for a guide on getting started.