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KlausVigo
/
phangorn
Phylogenetic analysis in R
http://klausvigo.github.io/phangorn/
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#174
KlausVigo
closed
3 days ago
0
Consistency Index error
#173
kr3118
opened
1 week ago
1
Inquiry About Setting Character Weights in `optim.parsimony` Function
#172
Xinru99
opened
1 week ago
2
Duplicated sites are ignored when computing parsimony using "site" option
#171
cwbcm
closed
1 month ago
2
iupac DNA seq
#170
nicolo-tellini
closed
1 month ago
1
update man pages
#169
KlausVigo
closed
2 months ago
0
sync Armadillo
#168
KlausVigo
closed
2 months ago
0
Simulate coding nucleotide sequences
#167
trilisser
opened
3 months ago
0
fix labels land plot margins in plot.networx
#166
KlausVigo
opened
3 months ago
0
ancestral.pars differences between 2.11.1 and 3.0.0
#165
colejensen
opened
3 months ago
0
Please use `make_graph` instead of `graph`
#164
szhorvat
closed
4 months ago
1
Single data point causes BAB function to return error
#163
spetersongit
opened
6 months ago
0
rotate labels
#162
locusclassicus
closed
5 months ago
5
phangorn for webR / wasm
#161
isbool
closed
6 months ago
0
Error in edgeMatrix[k, 1:6] <- c(ab, cd, i, f) : number of items to replace is not a multiple of replacement length
#160
amizeranschi
closed
7 months ago
1
OSX 14: Installation error
#159
akhst7
closed
8 months ago
2
plm_bb gets into a endless Ratchet iteration loop ?
#158
akhst7
closed
8 months ago
2
Error message 'R session aborted' when running modelTest(primates)
#157
Zhangvvv
opened
9 months ago
2
gamma shape completely change after optimisation
#156
trilisser
closed
9 months ago
4
nnls.tree fails with some trees
#155
mguzmann
closed
10 months ago
2
R is crashed when loading a phangorn library
#154
trilisser
closed
10 months ago
5
library(phangorn) error
#153
wang0430
opened
11 months ago
3
modelTest seems to require additional inputs
#152
Phylloxera
closed
10 months ago
5
test
#151
KlausVigo
closed
1 year ago
0
write.phyDat Problem
#150
ChristophKnapp
closed
1 year ago
3
pml segfault: memory not mapped
#149
lemmonquiche
opened
1 year ago
3
Data availability
#148
Neclow
opened
1 year ago
0
optim.pml hangs infinitely
#147
hberger
closed
1 year ago
4
densiTree not working
#146
Cosmophasis
closed
1 year ago
2
Unable to load module "Fitch_mod": vector is too large
#145
mdhall272
closed
1 year ago
3
`pml()` segfault: memory not mapped
#144
iferres
opened
1 year ago
2
Replace rgl.texts with texts3d
#143
dmurdoch
closed
1 year ago
1
add transfer bs and assigning bs
#142
iris-bk
closed
1 year ago
1
Different results from modelTest() with the same input file
#141
TMAdams
closed
1 year ago
4
RF distance inaccuracy
#140
kbhoehn
closed
1 year ago
2
add bab and change figures
#139
iris-bk
closed
1 year ago
1
small improvements for vignettes
#138
iris-bk
closed
1 year ago
1
worked on vignettes and added mite files
#137
iris-bk
closed
1 year ago
1
rename for order
#136
iris-bk
closed
1 year ago
0
implemented new features and improved structure
#135
iris-bk
closed
1 year ago
1
improvement
#134
iris-bk
closed
1 year ago
0
move modelTest
#133
iris-bk
closed
1 year ago
1
How can I access the probabilities using ancestral pml of entire sequence
#132
xbonner13
opened
1 year ago
0
Ancestral Sequence Reconstruction with ancestral.pml
#131
MarStreicher
opened
2 years ago
3
error in networx
#130
basic99
closed
2 years ago
3
Inconsistent behaviour between subset.phyDat and "[.phyDat" with consequences for glance
#129
NeuKon
closed
2 years ago
3
treedist() no longer working for non-binary trees
#128
jc17659
closed
2 years ago
3
Release phangorn 2.10.0
#127
KlausVigo
closed
2 years ago
0
NNI parallelization
#126
teng-gao
closed
1 year ago
2
Phangorn distance functions crash R with segmentation fault when alignment contains missing values.
#125
ejurga
opened
2 years ago
2
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