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Knowledge-Graph-Hub / kg-microbe

https://knowledge-graph-hub.github.io/kg-microbe/index.html
BSD 3-Clause "New" or "Revised" License
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link Bacdive isolation source categories to each other to represent hierarchy #191

Open realmarcin opened 4 days ago

realmarcin commented 4 days ago

"Cat1": "#Environmental", "Cat2": "#Aquatic", "Cat3": "#Mangrove

NCBITaxon|Strain -> location_of -> Cat3/Cat2/Cat1 -> subclass_of -> Cat2 -> Cat1

bsantan commented 4 days ago

Edges added in PR #189, however need to consider cases where there is some branching in the hierarchy, e.g. {‘Cat1’: ‘#Environmental’, ‘Cat2’: ‘#Aquatic’, ‘Cat3’: ‘#Geologic’}, {‘Cat1’: ‘#Environmental’, ‘Cat2’: ‘#Terrestrial’, ‘Cat3’: ‘#Geologic’}. We might consider concatenating Cat2 and Cat3 for more specificity