ingest microbe taxon to taxon edges from mondo

[cmungall]

include infectious disease branch of mondo, plus associated taxa

you may want to use robot here

note; we may want to remap. I would do this with a SPARQL CONSTRUCT

mondo has

• disease has-agent taxon (typically virus/bacteria/fungus)
• disease transmitted-by taxon (typically eukaryote, e.g insect, mammal)

we want to transform these into organism-organism edges, and annotate the edges with the disease

e.g.

• <<sars-cov-2 interacts-with homo-sapiens>> causes: mondo:COVID-19

in mondo you can assume the organism is human unless it has an in-taxon edge

we may actually want to push the generation of this kgx file into the mondo pipeline cc @matentzn

we may want to include these edges in kg-covid-19 cc @justaddcoffee @realmarcin