Closed Kdreval closed 1 month ago
Found edge cases where vcf2maf is stuck at these steps:
job count min threads max threads ------------------------- ------- ------------- ------------- _vcf2maf_normalize_prefix 2 1 1 _vcf2maf_output_maf 2 1 1 _vcf2maf_reannotate 2 4 4 all 1 1 1 total 9 1 12
because the reannotate rule can't handle empty maf file. The command has to be edited to handle this separately
The fix is in PR #318
Found edge cases where vcf2maf is stuck at these steps:
because the reannotate rule can't handle empty maf file. The command has to be edited to handle this separately