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LadnerLab
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PepSIRF
PepSIRF: Peptide-based Serological Immune Response Framework
GNU General Public License v3.0
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Bump rexml from 3.3.6 to 3.3.9 in /docs
#257
dependabot[bot]
opened
5 days ago
0
Change version number to 1.7.0
#256
SeanGolez
closed
4 weeks ago
0
Release 1.7.0
#255
SeanGolez
closed
4 weeks ago
1
Add ability run pepsirf as a docker image
#254
SeanGolez
closed
1 month ago
0
Docker features
#253
SeanGolez
closed
1 month ago
0
Check that sample names are matching with threshold files
#252
SeanGolez
closed
1 month ago
0
Enrich throws segmentation fault when --samples input is formatted incorrectly
#251
SeanGolez
closed
1 month ago
0
Bump rexml from 3.3.0 to 3.3.6 in /docs
#250
dependabot[bot]
closed
4 weeks ago
0
Bump rexml from 3.3.0 to 3.3.3 in /docs
#249
dependabot[bot]
closed
2 months ago
1
Fixed OpenMP compatibility with MacOS
#248
SeanGolez
closed
3 months ago
1
Demux: Added message for total time taken
#247
SeanGolez
closed
3 months ago
0
add time for processing to demux log file
#246
ekelley903
closed
3 months ago
0
Create C++ version of link_patternedKmers.py with parallelization
#245
SeanGolez
opened
4 months ago
1
Deconv iss233
#244
SeanGolez
closed
4 months ago
0
Merge cluster generation scripts into master
#243
SeanGolez
closed
4 weeks ago
0
Bump activesupport from 6.0.5 to 7.1.3.4 in /docs
#242
dependabot[bot]
closed
4 months ago
0
Bump nokogiri from 1.14.3 to 1.16.5 in /docs
#241
dependabot[bot]
closed
4 weeks ago
0
Bump rexml from 3.2.5 to 3.3.0 in /docs
#240
dependabot[bot]
closed
4 months ago
0
Subjoin iss236
#239
SeanGolez
closed
3 months ago
0
Create linkageMap2GMT.py script
#238
SeanGolez
closed
4 months ago
0
Demux iss234
#237
SeanGolez
closed
3 months ago
0
Add pattern/regex option for subjoin to filter sample names
#236
SeanGolez
closed
3 months ago
0
Deconv iss233
#235
SeanGolez
closed
5 months ago
0
Option to output unmapped reads from demux
#234
jtladner
closed
3 months ago
0
Allow user to specify different score thresholds for different taxa
#233
jtladner
closed
5 months ago
0
Add option for using non-consecutive kmers to generate linkage map
#232
jtladner
closed
4 weeks ago
0
Create linkageMap2GMT.py script
#231
SeanGolez
closed
5 months ago
0
Revert "Revert "Sample list information""
#230
SeanGolez
closed
8 months ago
1
Revert "Sample list information"
#229
SeanGolez
closed
8 months ago
0
Sample list information
#228
SeanGolez
closed
8 months ago
0
More Information in Demux Output
#227
Num0Programmer
closed
8 months ago
0
Subjoin module: added exclude option test, and some updates to exclude option.
#226
SeanGolez
closed
8 months ago
0
Added exclude option in subjoin module (develop branch)
#225
SeanGolez
closed
8 months ago
0
Created exclude option for the subjoin module.
#224
SeanGolez
closed
8 months ago
0
Add --exclude option to subjoin module
#223
jtladner
closed
8 months ago
0
Demux iss221
#222
Num0Programmer
closed
5 months ago
0
Automatic library truncation when running demux
#221
jtladner
closed
3 months ago
0
Left in day, month, and year information for log files.
#220
Num0Programmer
closed
1 year ago
0
Deconv iss218
#219
Num0Programmer
closed
3 months ago
1
Add option for user-defined, tab-delimited ID name map
#218
jtladner
closed
1 month ago
1
Demux iss56
#217
Num0Programmer
closed
1 year ago
0
Link iss210
#216
Num0Programmer
closed
1 year ago
0
Link iss210
#215
Num0Programmer
closed
1 year ago
1
Link iss210
#214
Num0Programmer
closed
1 year ago
2
Logging iss2
#213
Num0Programmer
closed
1 year ago
0
Link iss210
#212
Num0Programmer
closed
1 year ago
1
Bump commonmarker from 0.23.9 to 0.23.10 in /docs
#211
dependabot[bot]
closed
4 months ago
0
Linkage Map Creation Crashes When Sequence Does Not Have A SpeciesID
#210
Num0Programmer
closed
3 months ago
1
Pepsirf test iss152
#209
Num0Programmer
closed
1 year ago
0
Pepsirf test iss152
#208
Num0Programmer
closed
1 year ago
1
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