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LegumeFederation
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legfed_gene_families
A repository for managing tasks relating to the production of gene families for use by the Legume Federation
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phylogenes (aka PANTHER + more plant genomes) evaluation
#13
adf-ncgr
opened
5 years ago
0
alignment + tree construction against phytozome_12_1 Angiosperm families
#12
adf-ncgr
closed
6 years ago
0
How to deal appropriately with species for which multiple genomes/annotations exist
#11
sammyjava
closed
2 years ago
8
create lorax instance backed by new gene families on legfed-dev
#10
adf-ncgr
closed
6 years ago
0
need polypeptides fastas for outgroup datasets
#9
adf-ncgr
closed
7 years ago
6
load legfed_v1_0.L trees into test db for assessing behavior in systems
#8
adf-ncgr
closed
6 years ago
3
some trees have single-quotes around their node labels- intentional or can we make consistent?
#7
adf-ncgr
closed
7 years ago
1
consistency analysis of gene family classifiers
#6
joelb123
opened
7 years ago
1
alignability assessment
#5
joelb123
opened
7 years ago
0
reconciliation of gene and species trees
#4
joelb123
opened
7 years ago
0
support multiple gene family defs
#3
joelb123
opened
7 years ago
0
bootstrap assessment of support
#2
joelb123
opened
7 years ago
2
gene family statistics
#1
joelb123
opened
7 years ago
0