open-multi-echo-data

Open multi-echo datasets

This repository contains code to do the following for multi-echo fMRI datasets on OpenNeuro:

1. Create a Datalad super-dataset.
2. Copy

   dsXXXXXX/
   inputs/
       data/       <-- subdataset from OpenNeuro
           code/   <-- code to fix BIDS issues in raw dataset
   outputs/
       fmriprep/   <-- subdataset of fMRIPrep derivatives
       afni/       <-- subdataset of AFNI derivatives
   code/           <-- code to run fMRIPrep and AFNI