MEGA-GO MegaGO issues - Githubissues

MEGA-GO / MegaGO

Calculate semantic distance for sets of Gene Ontology terms

MIT License

5 stars 2 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Bump certifi from 2020.4.5.2 to 2022.12.7 in /api

#56 dependabot[bot] opened 1 year ago
0
Bump postcss from 7.0.32 to 7.0.39 in /web

#55 dependabot[bot] opened 2 years ago
0
Bump ws from 6.2.1 to 6.2.2 in /web

#54 dependabot[bot] opened 2 years ago
0
Bump path-parse from 1.0.6 to 1.0.7 in /web

#53 dependabot[bot] opened 2 years ago
0
Bump url-parse from 1.4.7 to 1.5.4 in /web

#52 dependabot[bot] opened 2 years ago
0
Bump color-string from 1.5.3 to 1.9.0 in /web

#51 dependabot[bot] opened 2 years ago
0
Bump axios from 0.21.1 to 0.21.2 in /web

#50 dependabot[bot] opened 2 years ago
0
Obtain output in matrix like text file

#49 LucvZon opened 2 years ago
1
Error when plotting the heatmaps

#48 Jokendo-collab opened 3 years ago
5
Exporting the results from the web intephase

#47 Jokendo-collab opened 3 years ago
1
Bump urllib3 from 1.25.9 to 1.26.5 in /api

#46 dependabot[bot] opened 3 years ago
0
Bump flask-cors from 3.0.8 to 3.0.9 in /api

#45 dependabot[bot] opened 3 years ago
0
Add link to the MegaGO publication to the footer of the site

#44 pverscha opened 3 years ago
1
Bump py from 1.8.2 to 1.10.0 in /api

#43 dependabot[bot] opened 3 years ago
0
Bump jinja2 from 2.11.2 to 2.11.3 in /api

#42 dependabot[bot] opened 3 years ago
0
Allow filtering on a subset of GO terms

#41 bmesuere opened 3 years ago
0
Bump axios from 0.19.2 to 0.21.1 in /web

#40 dependabot[bot] closed 3 years ago
0
Feature/auto publish updates

#39 pverscha closed 3 years ago
2
Feature/documentation

#38 pverscha closed 3 years ago
0
Add documentation to the website

#37 pverscha closed 3 years ago
1
Add button to directly load sample data

#36 pverscha closed 3 years ago
3
speed up computations + show progress bar

#35 pverscha closed 3 years ago
1
Change similarity metric to lin metric

#34 rababerladuseladim closed 3 years ago
0
Show progress bar when performing analysis

#33 pverscha closed 3 years ago
0
Interpretation problem when comparing identical high-level terms

#32 tivdnbos opened 4 years ago
3
[Bug] Remove warning when empty line is added to GO list

#31 tivdnbos opened 4 years ago
0
[FeatureRequest] Add progressbar to web application

#30 tivdnbos opened 4 years ago
0
feature/web

#29 pverscha closed 4 years ago
0
Fix similarity above one in specific cases

#28 pverscha closed 4 years ago
0
with missing cache files, precomputation status messages appear in output

#27 rababerladuseladim opened 4 years ago
0
Split computations per GO domain

#26 pverscha closed 4 years ago
2
Fix division by zero error #21

#25 rababerladuseladim closed 4 years ago
0
Improve performance

#24 pverscha closed 4 years ago
0
formulas in readme are broken

#23 rababerladuseladim closed 4 years ago
1
Add documentation for most methods

#22 rababerladuseladim closed 4 years ago
0
Fix DivisionByZero error

#21 pverscha closed 4 years ago
0
Pre-calculating all GO-term comparisons

#20 pverscha closed 4 years ago
0
Implement benchmark

#19 pverscha closed 4 years ago
1
Sample data

#18 rababerladuseladim closed 4 years ago
0
Calculate and report similarity separately for each GO namespace

#17 rababerladuseladim closed 4 years ago
0
Change similarity value for non-comparable GO-term/GO-term-sets from -1 to nan

#16 rababerladuseladim closed 4 years ago
0
Goatools dependency update 1 0 3

#15 rababerladuseladim closed 4 years ago
0
Functional test fixes

#14 rababerladuseladim closed 4 years ago
0
Ideas for heuristics to decrease the number of comparisons.

#13 rababerladuseladim closed 4 years ago
2
How should code respond on non-existing terms?

#12 pverscha closed 4 years ago
1
Indexed go terms

#11 WassimG closed 4 years ago
0
Fix windows issues

#10 pverscha closed 4 years ago
0
Similarity values of non-comparable GO-term sets

#9 rababerladuseladim closed 4 years ago
2
Swarm plot visualization

#8 rababerladuseladim closed 4 years ago
1
Add sample data

#7 bmesuere closed 4 years ago
0