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MOZI-AI
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annotation-scheme
Human Gene annotation service backend
GNU General Public License v3.0
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Use delete-dup-atoms instead of delete-duplicates
#82
linas
closed
4 years ago
2
Remove the env.in file.
#81
linas
closed
4 years ago
13
Remove the build-aux directory
#80
linas
closed
4 years ago
33
Fixes to latest chenges
#79
tanksha
closed
4 years ago
0
Remove unused file
#78
linas
closed
4 years ago
6
Remove obsolete module. Also fix whitespace.
#77
linas
closed
4 years ago
0
Remove build-aux directory
#76
linas
closed
4 years ago
3
RNA annotation
#75
tanksha
closed
4 years ago
0
Use a user-writable filepath.
#74
linas
closed
4 years ago
0
Run issues
#73
linas
closed
4 years ago
12
Fix guile detection in configure.
#72
linas
closed
4 years ago
0
Get tests/util-tests.scm to pass
#71
linas
closed
4 years ago
0
test failure
#70
linas
closed
4 years ago
26
Get rid of warning message on (opencog query)
#69
linas
closed
4 years ago
0
Check for the agi-bio-science module
#68
linas
closed
4 years ago
2
The query module is obsolete!
#67
linas
closed
4 years ago
0
build failures
#66
linas
closed
4 years ago
9
Fix warning about CLEANFILES
#65
linas
closed
4 years ago
0
Newer build-aux files.
#64
linas
closed
4 years ago
0
Fix for broken guile detection.
#63
linas
closed
4 years ago
1
Fixes biogrid pairs filter during cross annotation
#62
tanksha
closed
4 years ago
0
Includes coding and noncoding RNA, fixes issue with parsing biogrid
#61
tanksha
closed
4 years ago
0
Remove outdated gene symbols and replace them with the current
#60
tanksha
closed
4 years ago
0
Go terms for protein-form of genes and Changes to biogrid PPI
#59
tanksha
closed
4 years ago
0
Fix issues with scheme files not being written
#58
Habush
closed
4 years ago
0
Suggest similar gene symbols when a request gene symbol can't be found
#57
Habush
closed
4 years ago
0
fixes to the sampledata
#56
tanksha
closed
4 years ago
0
Improve the conversion of JSON to procedures
#55
Habush
closed
4 years ago
0
Bug fix with proteins not showing up
#54
tanksha
closed
4 years ago
0
annotate-genes function accepts a string or bytevector request instead of hard-coded scheme function
#53
Habush
closed
4 years ago
0
Biogrid annotation fixes
#52
tanksha
closed
4 years ago
0
Fixed issue of pathway interacting genes not showing up in the result
#51
Habush
closed
4 years ago
0
Pathway genes interaction example
#50
tanksha
closed
4 years ago
0
Make the default biogrid option to be true
#49
tanksha
closed
4 years ago
0
Add biogrid parameter for gene-pathway annotation
#48
tanksha
closed
4 years ago
0
Fix issue #46 where output interaction of biogrid genes were missing
#47
Habush
closed
4 years ago
0
Fix the output interaction missing link in biogrid
#46
Habush
closed
4 years ago
0
Fix the issue of VariableNodes being found in the result
#45
Habush
closed
4 years ago
0
Add unit tests for annotation functions
#44
Habush
closed
4 years ago
0
Remove duplicate edges from pathway and biogrid results
#43
Habush
closed
5 years ago
0
added datasets to test the new features
#42
tanksha
closed
5 years ago
0
Update the biogrid PPI and do go-annotation for all genes in the result
#41
tanksha
closed
5 years ago
0
Add Multithreading support
#40
Habush
closed
4 years ago
1
Latest updates to the annotation result
#39
tanksha
closed
5 years ago
0
Completed sample dataset for IGF1
#38
tanksha
closed
5 years ago
0
Added coding genes for each proteins
#37
tanksha
closed
5 years ago
0
Refactor the code to use modules and add README
#36
Habush
closed
5 years ago
0
Fix a bug that didn't link Genes with the proteins they express in biogrid
#35
Habush
closed
5 years ago
0
link pathway proteins to biogrid genes
#34
mjsduncan
closed
5 years ago
1
Fix error in reactome function when protein option is false
#33
Habush
closed
5 years ago
0
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