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MOZI-AI
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annotation-scheme
Human Gene annotation service backend
GNU General Public License v3.0
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Optimize generate-interactors for performance.
#132
linas
closed
4 years ago
2
memoize locate-node
#131
linas
closed
4 years ago
0
memoized version of find-name
#130
linas
closed
4 years ago
0
Memoize the node-info function for a performance boost.
#129
linas
closed
4 years ago
0
Fix bugs in pull req #125
#128
linas
closed
4 years ago
1
further simplification of pathway-hierarchy
#127
linas
closed
4 years ago
0
Fix for guile RAM/garbage-collection explosion.
#126
linas
closed
4 years ago
0
Use ContextLink instead of AndLink
#125
tanksha
closed
4 years ago
0
dataset issues: `(MoleculeNode "ChEBI:nan")`
#124
linas
opened
4 years ago
1
Whitelist the annotation functions that are executed
#123
Habush
closed
4 years ago
1
Mutation be gone
#122
rekado
closed
4 years ago
9
Simplify parser
#121
rekado
closed
4 years ago
4
Avoid memory leak of SetLinks
#120
tanksha
closed
4 years ago
2
Dataset issues - non-symmetric intractions
#119
linas
closed
4 years ago
11
Dataset issues - self-interaction
#118
linas
closed
4 years ago
10
Implement more link types.
#117
linas
opened
4 years ago
6
New test failures since recent merges
#116
rekado
closed
4 years ago
1
Add more parser tests
#115
Habush
closed
4 years ago
0
Incorrect biogrid result
#114
tanksha
closed
4 years ago
0
PATCH: memoize locate-node, etc. for 1.5x perf
#113
linas
closed
4 years ago
2
Simplify parser
#112
rekado
closed
4 years ago
4
guile heap blow-up on file write
#111
linas
closed
4 years ago
17
PATCH: Cache pubmed-id lookup.
#110
linas
closed
4 years ago
3
Add documentation. Also avoid memleak
#109
linas
closed
4 years ago
0
Cache pathway-gene-interactors for 3x speedup!
#108
linas
closed
4 years ago
4
Filter noncoding RNA
#107
tanksha
closed
4 years ago
0
PATCH: optimize generate-result
#106
linas
closed
4 years ago
2
PATCH: Fixes for pathway-hierarchy/check-pathway
#105
linas
closed
4 years ago
3
Added missed node type, fixes issue #83
#104
tanksha
closed
4 years ago
0
optimize generate-interactors
#103
linas
closed
4 years ago
7
Fixes pathway annotation crash, issue #91
#102
tanksha
closed
4 years ago
1
Remove unnecessary call/cc
#101
Habush
closed
4 years ago
4
Add Guix environment file
#100
rekado
closed
4 years ago
6
GUILE_SITE_GO_DIR is undefined
#99
rekado
closed
4 years ago
1
Performance Status
#98
linas
closed
4 years ago
18
Provide an efficient implementation for `find-name`
#97
linas
closed
4 years ago
2
Provide improved implementation for predicate.
#96
linas
closed
4 years ago
1
Fix unusual search code.
#95
linas
closed
4 years ago
0
Remove call to delete-duplicates
#94
linas
closed
4 years ago
0
Why fork guile-json?
#93
rekado
closed
4 years ago
10
Remove the auto-generated file.
#92
linas
closed
4 years ago
1
Crash in gene-pathway-annotation when namespace is set.
#91
linas
closed
4 years ago
6
loading current datasets generates error
#90
linas
closed
4 years ago
2
is-cellular-component? appears to be buggy?
#89
linas
closed
4 years ago
3
find-pathway-name should be written out
#88
linas
closed
4 years ago
8
Updated Readme
#87
tanksha
closed
4 years ago
0
Fix the README instructions.
#86
linas
closed
4 years ago
0
General optimizations...
#85
linas
closed
4 years ago
5
Use #t and #f not string "True"
#84
linas
closed
4 years ago
5
find-go-term is used inconsistently
#83
linas
closed
4 years ago
7
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