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MPIIComputationalEpigenetics
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Dive
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Chromatin state does not change
#118
felipealbrecht
closed
6 years ago
0
Check if the overlap filtering is working correctly
#117
felipealbrecht
closed
6 years ago
1
Top genome name does not change after changing in the wizard
#116
felipealbrecht
closed
6 years ago
0
Sort chromatin states alphabetically
#115
felipealbrecht
closed
6 years ago
0
Check/improve gene ontology screen
#114
felipealbrecht
closed
6 years ago
1
The queries workflow does not show the full workflow when saving stack for comparison
#113
felipealbrecht
closed
6 years ago
0
Do not go to the initial window (wizard) after removing an element from the stack
#112
felipealbrecht
closed
6 years ago
0
Implement wizard for regions enrichment
#111
felipealbrecht
closed
6 years ago
1
Select the BioSources that you wish to dive [in]
#110
mlist
closed
6 years ago
0
previous request is not canceled when users (un-) select biosources
#109
felipealbrecht
closed
6 years ago
0
Count overlaps fail when it has too many data sets
#108
felipealbrecht
closed
6 years ago
0
check why all menu items arent being loaded
#107
felipealbrecht
closed
6 years ago
1
Load experiment by the url
#106
felipealbrecht
opened
6 years ago
0
Also show their .wig data when exporting chip-atlas data to genome browser
#105
felipealbrecht
opened
6 years ago
0
Set the distance from TSS
#104
felipealbrecht
closed
6 years ago
1
Reload menu after changing genome
#103
felipealbrecht
closed
6 years ago
1
SImilar data in comparisons
#102
demuellae
closed
6 years ago
1
Selecting data by category
#101
demuellae
opened
6 years ago
1
(Similar Plot) Filter the elements in the "most similar" plot.
#100
demuellae
opened
6 years ago
1
Similar data
#99
demuellae
closed
6 years ago
0
Overlapping takes a long time
#98
demuellae
closed
6 years ago
1
TFBS
#97
demuellae
closed
6 years ago
1
Usecase: DIVE for hypothesis generation
#96
mlist
closed
4 years ago
0
Usecase: Relate own data to IHEC data
#95
mlist
closed
4 years ago
2
Usecase: Dive into IHEC data for extracting important regions
#94
mlist
opened
6 years ago
2
investigate if similarity search can be improved
#93
mlist
opened
6 years ago
6
No user feedback when uploading a bed file takes longer
#92
mlist
closed
6 years ago
0
Upload regions must support more data formats
#91
mlist
closed
6 years ago
0
Not clear that drag and drop is supported
#90
mlist
closed
6 years ago
0
Redesign progress bar. It should be in a static location
#89
mlist
closed
6 years ago
1
All dataset selections should be searchable
#88
mlist
closed
6 years ago
0
Visual feedback when loading list of datasets.
#87
mlist
closed
6 years ago
1
Make clearly visible which reference genome the user is working on
#86
mlist
closed
6 years ago
0
Visually highlight newly added filter steps
#85
mlist
opened
6 years ago
0
Add button to filter settings
#84
mlist
closed
6 years ago
0
Use wizard in the overlap enrichment interface
#83
mlist
closed
6 years ago
0
Dive's UI needs to split it tasks into workflow steps and guide the user
#82
mlist
closed
6 years ago
3
"Overlapping with <empty"> in the overlapping plot when user upload its own data.
#81
felipealbrecht
opened
6 years ago
0
Use post for info() command (Bug in select h3k4me3 in hg19)
#80
felipealbrecht
closed
6 years ago
0
Check why duplicated menu items when select hg19 genome in the dive.mpi
#79
felipealbrecht
closed
6 years ago
0
Better genome selectio
#78
felipealbrecht
closed
6 years ago
0
Download enrichment results as table
#77
felipealbrecht
opened
6 years ago
0
Filter experiments by Epigenetics Marks in the Similar Experiments Plot
#76
felipealbrecht
opened
6 years ago
0
Cut the biosources by number of experiments of this biosource
#75
felipealbrecht
opened
6 years ago
0
filtering columns directly in the table of the 'get regions' screen
#74
felipealbrecht
opened
6 years ago
1
Improve gene ontology page
#73
felipealbrecht
closed
6 years ago
1
Fix shitty interface in load query (press enter and after click on the button)
#72
felipealbrecht
closed
6 years ago
0
Clicking on the (-) must not go the main screen
#71
felipealbrecht
closed
6 years ago
0
Merge the same epigenetic marks in the similar plots.
#70
felipealbrecht
closed
6 years ago
0
Error in get regions from input_regions (upload file, paste regions)
#69
felipealbrecht
opened
6 years ago
1
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