MRCIEU Lifecourse-GWAS issues

MRCIEU / Lifecourse-GWAS

MIT License

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issues

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flashpca compilation

#32 explodecomputer closed 3 days ago
0
Add age covariate to the lifestage phenotype categories

#31 explodecomputer opened 3 months ago
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Updated details in phenotype file

#30 GenevieveLeyden closed 4 months ago
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Phenotype definitions list?

#29 MichelNivard opened 5 months ago
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27 alphabetical effect allele at the summary stage rather than individual stage

#28 explodecomputer closed 5 months ago
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Alphabetical effect allele at the summary stage rather than individual stage

#27 explodecomputer closed 5 months ago
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catching fastgwa-mlm errors

#26 explodecomputer closed 7 months ago
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Handle GCTA errors when using sparse GRM

#25 explodecomputer opened 7 months ago
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Implement Box-m LD collection to check differential LD

#24 explodecomputer opened 7 months ago
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22 integrating 02 with 01 and 03

#23 explodecomputer closed 7 months ago
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Integrating 02 with 01 and 03

#22 explodecomputer closed 7 months ago
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Organise phenotypes remove outliers hide individual data

#21 eleanorsanderson closed 7 months ago
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quickly format ALSPAC data

#20 gracemarionpower opened 8 months ago
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added gwas scripts

#19 explodecomputer closed 10 months ago
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15 organise variant ids

#18 GenevieveLeyden closed 10 months ago
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organsie genotype data

#17 GenevieveLeyden opened 10 months ago
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14 format alspac genotype data

#16 GenevieveLeyden closed 10 months ago
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Organise variant IDs

#15 explodecomputer closed 10 months ago
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Format ALSPAC genotype data

#14 GenevieveLeyden closed 10 months ago
0
Complete GWAS step

#13 explodecomputer closed 10 months ago
3
Hackathon

#12 explodecomputer closed 7 months ago
0
add in remove outliers

#11 eleanorsanderson closed 11 months ago
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adding draft scripts for check data and ancestry

#10 explodecomputer closed 11 months ago
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Organise phenotypes remove outliers hide individual data

#9 eleanorsanderson closed 1 year ago
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Detect relateds

#8 explodecomputer closed 7 months ago
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genetics - generate PCs

#7 explodecomputer closed 7 months ago
1
genetics - detect ancestry

#6 explodecomputer closed 11 months ago
1
added a random line

#5 explodecomputer closed 1 year ago
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organise_phenotypes - outlier detection and removal

#4 explodecomputer opened 1 year ago
1
Calculate PCs for analysis

#2 explodecomputer closed 7 months ago
0
Determine ancestry

#1 explodecomputer closed 7 months ago
0
Draft phenotype summarising script

#3 explodecomputer closed 7 months ago
0