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MadsAlbertsen
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mmgenome
Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes
https://kasperskytte.github.io/mmgenome2/
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problems installing mmgenome in R
#45
phlatphish
opened
2 years ago
0
mmplot_locator(p) warning
#44
pennyhan
closed
5 years ago
2
Confirm that use of BLAST's `-max_target_seqs` is intentional
#43
armish
opened
5 years ago
0
Detailed description of import file for network.pl and extract.fastq.for.reassembly.pl
#42
chenziwu5
opened
5 years ago
12
New issue about running MEGAN
#41
chenziwu5
closed
6 years ago
0
plot coverage variation of a bin across all samples
#40
Kirk3gaard
opened
6 years ago
1
mmplot to Highlight contigs that have already been binned
#39
Kirk3gaard
opened
6 years ago
1
Difficulty installing
#38
KasperSkytte
opened
6 years ago
6
Info on citation should be on the front page
#37
Kirk3gaard
opened
6 years ago
0
Labelling of contigs
#36
Kirk3gaard
opened
6 years ago
2
Added BH-SNE support
#35
Kirk3gaard
closed
7 years ago
0
How to generate "tax.txt"
#34
TeethBL
opened
7 years ago
1
Master
#33
SorenKarst
closed
7 years ago
0
Import example sam file for the network.pl script
#32
caonetto
closed
7 years ago
0
Simplify data structure
#31
SorenKarst
opened
7 years ago
1
Update mmstats.R
#30
Kirk3gaard
closed
7 years ago
0
mmplot_locator error
#29
maxemil
closed
7 years ago
20
Create mmfractions
#28
Kirk3gaard
closed
7 years ago
1
Using contigs instead of scaffolds for the genome extraction workflow
#27
adityabandla
closed
6 years ago
3
Extracting 16S rRNA sequences
#26
vrbrand
closed
7 years ago
2
Update README.md
#25
Kirk3gaard
opened
8 years ago
0
Update rRNA.sh
#24
Kirk3gaard
opened
8 years ago
0
Update README.md
#23
Kirk3gaard
opened
8 years ago
0
Update mmref.R
#22
Kirk3gaard
closed
8 years ago
0
Importing FASTA data using Biostrings into mmgenome
#21
jrherr
opened
9 years ago
3
More convenient output from mmplot_locator (so it’s easier to copy and paste)
#20
nr0cinu
closed
4 years ago
1
spelling of default
#19
Kirk3gaard
closed
8 years ago
0
Not a problem, but a couple of feature request
#18
nmb85
closed
9 years ago
4
Metadata in data(eg) is incorrect for Candidatus genera
#17
nr0cinu
closed
4 years ago
1
Attempt to set 'colnames' on an object with less than two dimensions
#16
dburkhardt
closed
9 years ago
1
mmplot: duplicates = TRUE produces error when no duplicates are present
#15
SorenKarst
opened
9 years ago
0
mmplot_locator: Locator coordinate system out of sync when using custom axis limits
#14
SorenKarst
opened
9 years ago
1
Bugfix: mmstats
#13
SorenKarst
closed
9 years ago
0
Update mmstats.R
#12
Kirk3gaard
closed
9 years ago
1
Scaffold names not recognized?
#11
neavemj
closed
9 years ago
3
Update README.md
#10
Kirk3gaard
closed
9 years ago
0
Update mmplot.R
#9
Kirk3gaard
closed
9 years ago
0
Check inputfiles for correctness
#8
MadsAlbertsen
closed
10 years ago
1
mmplot_pairs help specification
#7
SorenKarst
closed
10 years ago
1
Rename output file in rRNA.sh
#6
SorenKarst
closed
10 years ago
0
Update data.generation.2.1.0.sh
#5
Kirk3gaard
closed
10 years ago
0
Replace alphahull with sp
#4
SorenKarst
closed
10 years ago
1
Alphahull v.1.0.0 broken
#3
MadsAlbertsen
closed
10 years ago
1
Bugfix: Using ggplot limits gave faulty co-ordinate system
#2
SorenKarst
closed
10 years ago
0
Bugfix: Using ggplot limits gave faulty co-ordinate system
#1
SorenKarst
closed
10 years ago
1