search

MehranAG77 / CellML_Model_Verification

0 stars 0 forks source link

CellML Annotations #1

Open MehranAG77 opened 9 months ago

MehranAG77 commented 9 months ago

Need a tool to read and import annotations created in CellML to Python!

To identify the variables created by CellML users, annotations are required to be read and understood. Based on the definitions for each variable provided by the user, its role in the model can be realized! Therefore, I need it to have annotations in Python to classify the variables and understand the equations!

MehranAG77 commented 9 months ago

Having annotations, we need to know what the variable is used for, e.g. the concentration of a chemical compound in a compartment. For the variables linked to chemical compounds, the ChEBI code is also required to know the chemical composition of the compound.