MikeAxtell / bam2wig

Conversion of a BAM alignment to wiggle and bigwig coverage files, with flexible reporting options
GNU General Public License v3.0
16 stars 5 forks source link

No support for indel / intron / clipped reads #3

Open MikeAxtell opened 6 years ago

MikeAxtell commented 6 years ago

Current version (1.4) gives incorrect results for alignments with indels, introns, or clipping relative to the reference. Major issue!

Thanks to Jiyoung Lee for finding this.