Mouse-Imaging-Centre pyminc issues

Mouse-Imaging-Centre / pyminc

A python interface to the MINC 2 library, allowing use of numpy arrays to access MINC data, and other such similar goodies, developed by Jason Lerch

http://en.wikibooks.org/wiki/MINC/Tutorials

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issues

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Provide a wheel containing libminc

#42 bcdarwin opened 2 years ago
0
Take advantage of MINC_TOOLKIT variable to find library to load

#41 gdevenyi closed 2 years ago
2
Provide a way to point to libminc shared object

#40 bcdarwin opened 2 years ago
1
Error when importing pyminc

#39 koegl closed 2 years ago
7
exception with malformed minc file doesn't bubble up to show which file is bad

#38 gdevenyi opened 3 years ago
0
numpy array metadata lost when calling into C, causing unexpected behaviour with non-contiguous ndarrays

#37 bcdarwin closed 3 years ago
0
Add volume properties to support compression control

#36 gdevenyi opened 4 years ago
3
`.data` doesn't check `dataLoadable`

#35 bcdarwin opened 4 years ago
0
sporadic test failures

#34 bcdarwin closed 4 years ago
3
[feature] add alternate Nibabel-compatible API?

#33 bcdarwin opened 4 years ago
0
Fix setHyperslab

#32 d-chagnon closed 3 years ago
0
Fix inverted logic in label code

#31 gdevenyi closed 4 years ago
10
Added functionality for accessing linear transform compoenent of gene…

#30 jgsled closed 5 years ago
1
drop python2 support ?

#29 bcdarwin closed 3 years ago
0
Mincheader lost when using pyminc ?

#28 cpresseau opened 6 years ago
2
some assertAlmostEqual tests break with newer libs

#27 bcdarwin closed 5 years ago
1
Cannot find libminc2.so

#26 yohanyee closed 6 years ago
4
Mac OS Issue

#25 dgmclare opened 7 years ago
9
Installation instructions for Mac

#24 cfhammill opened 8 years ago
2
mincException when trying factory.volumeLikeFile with 4D file.

#23 sulantha2006 opened 8 years ago
5
Direction cosines not supported ?

#22 cpresseau closed 8 years ago
2
add features to deal with xfm (transformation) files

#21 mcvaneede opened 8 years ago
0
add features to deal with tag files

#20 mcvaneede opened 8 years ago
0
update the libminc version check

#19 mcvaneede closed 3 years ago
1
When do we want traces of pyminc volumes on disk?

#18 mcvaneede closed 8 years ago
1
Set the image:complete attribute upon successful file writes

#17 mcvaneede closed 8 years ago
0
getVolumeRange fails, maybe on negative values?

#16 gdevenyi closed 8 years ago
5
Voxel-wise math returns hyperslabs instead of scalar values

#15 gdevenyi opened 8 years ago
7
Update datatype read/write flexibility

#14 mcvaneede closed 8 years ago
0
Combine functionality from py_minc into pyminc

#13 mcvaneede opened 9 years ago
1
Allow for float and double files to be written out by pyminc

#12 mcvaneede closed 10 years ago
1
allow files to be written out with compression

#11 mcvaneede opened 10 years ago
0
pyminc_test2.py fails on weave

#10 mcvaneede opened 10 years ago
0
pyminc crashes on files without a history attribute

#9 mcvaneede closed 10 years ago
0
Cryptic output when input data is not MINC 2

#8 mcvaneede closed 8 years ago
1
fix getHyperslab and create a function getHyperslabNormalized

#7 mcvaneede opened 11 years ago
0
mismatch between volumeType and underlying data

#6 mcvaneede closed 8 years ago
0
Fix for the definition of miget_dimension_sizes.

#5 carlohamalainen closed 11 years ago
3
document how to use the test script, and make it part of the installation

#4 mcvaneede opened 11 years ago
0
Should mincVolume() be called by default? Maybe the file should exist in memory only initially?

#3 mcvaneede closed 11 years ago
5
length of minc history

#2 mcvaneede opened 11 years ago
0
allow slice scaling to be turned off

#1 beierman opened 11 years ago
0