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NCBI-Hackathons / ga4gh-ncbi-api

Access data in NCBI using GA4GH methods
MIT License
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How to tell if a run has aligned reads? #24

Open david4096 opened 7 years ago

david4096 commented 7 years ago

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=sra&id=SRR5125027

david4096 commented 7 years ago

It seems like the assembly key will be on the RUN tag if it has been aligned.

We still haven't found where the count of aligned reads is stored.