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NKI-AI
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ahcore-old
Ahcore are the AI for Oncology histopathology core models
Apache License 2.0
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Dlup update compatibility
#27
EricMarcus-ai
closed
9 months ago
0
Inference Pipeline
#26
EricMarcus-ai
closed
9 months ago
0
Add tcga study codes as labels
#25
VanessaBotha
opened
10 months ago
0
add offset to reading the wsi region from the slide image.
#24
sinberlin2
closed
11 months ago
1
Enable Macenko Normalisation for P1000 images
#23
sinberlin2
closed
11 months ago
3
Implemented HED augmentation as Kornia `IntensityAugmentationBase2D`
#22
BPdeRooij
closed
1 year ago
0
Include HED augmentation compatible with existing Kornia augmentations
#21
BPdeRooij
closed
1 year ago
0
HE normalization
#20
AjeyPaiK
closed
1 year ago
1
Compute overall dice score
#19
AjeyPaiK
closed
1 year ago
1
Add tiffwriter callback
#18
JoostvDoorn
opened
1 year ago
0
Fixes/macenko
#17
AjeyPaiK
closed
1 year ago
0
Macenko Normalization not compatible with ahcore transforms
#16
AjeyPaiK
closed
1 year ago
0
`pytorch-lightning>=1.9.1` cannot import `LightningLoggerBase` from `pytorch_lightning.loggers`
#15
AjeyPaiK
closed
1 year ago
0
Added attention_unet and vanilla unet
#14
AjeyPaiK
closed
1 year ago
2
Feat/robustness epoch metrics
#13
Vlad-C-Crisan
closed
1 year ago
0
Now, ROIs do not contain unmapped pixels.
#12
AjeyPaiK
closed
1 year ago
4
The ROIs contain many unannotated regions that get mapped to background leading to suboptimal training.
#11
AjeyPaiK
closed
1 year ago
1
Make Optimizer and LR Scheduler more configurable
#10
jonasteuwen
opened
1 year ago
0
Code quality tracking
#9
jonasteuwen
opened
1 year ago
0
Attention U-net does not have variable depth
#8
jonasteuwen
closed
1 year ago
0
v0.0.1 tracking
#7
jonasteuwen
opened
1 year ago
0
Give examples for data_description
#6
jonasteuwen
opened
1 year ago
0
Need a different manifest for inference
#5
jonasteuwen
opened
1 year ago
0
TiffTracker does not support skipping of tiles
#4
jonasteuwen
closed
1 year ago
0
Fixes/inference tissue subtypes
#3
AjeyPaiK
closed
1 year ago
3
Tiff writer doesn't place predictions on CPU during inference
#2
AjeyPaiK
closed
1 year ago
0
Inference breaks for tissue_subtypes
#1
AjeyPaiK
closed
1 year ago
0