GeoMxWorkflows is a package that contains analysis vignettes for analyzing data from NanoString GeoMx Digital Spatial Profiler (DSP). It is intended as a instructive package, which demonstrates the application of other open source packages for the purposes of interpreting GeoMx data.
The master branch is the stable version of the Bioconductor package.
The dev branch is under active development and no guarantee is made on usability at any given time.
Ortogero, N.; Yang, Z.; Vitancol, R.; Griswold, M.; Henderson, D. GeomxTools: NanoString GeoMx Tools. R Package Version 1.0.0. NanoString Technologies Inc.; Seattle, WA 98109, USA. 2021.
Reeves, J.W.; Divakar, P.; Ortogero, N.; Griswold, M.; Yang, Z.; Zimmerman, S.; Vitancol, R.; and Henderson, D. GeoMxWorkflows: GeoMx Digital Spatial Profiler (DSP) data analysis workflows. R Package Version 1.0.0. NanoString Technologies Inc.; Seattle, WA 98109, USA. 2021.
This project is licensed under the MIT license.